Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CSMD2Q7Z408 PHGDH-209ENST00000641074 1780 ntBASIC14.73□□□□□ -0.05
CSMD2Q7Z408 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.73□□□□□ -0.05
CSMD2Q7Z408 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD2Q7Z408 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.73□□□□□ -0.05
CSMD2Q7Z408 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
CSMD2Q7Z408 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
CSMD2Q7Z408 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.73□□□□□ -0.05
CSMD2Q7Z408 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.73□□□□□ -0.05
CSMD2Q7Z408 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.73□□□□□ -0.05
CSMD2Q7Z408 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.73□□□□□ -0.05
CSMD2Q7Z408 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.73□□□□□ -0.05
CSMD2Q7Z408 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.73□□□□□ -0.05
CSMD2Q7Z408 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.73□□□□□ -0.05
CSMD2Q7Z408 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD2Q7Z408 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD2Q7Z408 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD2Q7Z408 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 SPDYE11-202ENST00000450699 704 ntBASIC14.72□□□□□ -0.05
CSMD2Q7Z408 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 SPDYE9P-201ENST00000570642 692 ntBASIC14.72□□□□□ -0.05
CSMD2Q7Z408 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 SPDYE10P-202ENST00000612005 668 ntBASIC14.72□□□□□ -0.05
CSMD2Q7Z408 SPDYE8P-202ENST00000612377 668 ntBASIC14.72□□□□□ -0.05
CSMD2Q7Z408 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 AC009949.1-201ENST00000623048 1830 ntBASIC14.72□□□□□ -0.05
CSMD2Q7Z408 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 PTCHD3P3-201ENST00000403073 906 ntBASIC14.72□□□□□ -0.05
CSMD2Q7Z408 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 PI4KAP1-204ENST00000612579 1703 ntBASIC14.72□□□□□ -0.05
CSMD2Q7Z408 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 MIR4525-201ENST00000580000 75 ntBASIC14.72□□□□□ -0.05
CSMD2Q7Z408 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD2Q7Z408 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSMD2Q7Z408 GPR53P-205ENST00000457298 1084 ntBASIC14.71□□□□□ -0.05
CSMD2Q7Z408 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSMD2Q7Z408 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.71□□□□□ -0.05
CSMD2Q7Z408 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CSMD2Q7Z408 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSMD2Q7Z408 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.71□□□□□ -0.05
CSMD2Q7Z408 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.71□□□□□ -0.05
CSMD2Q7Z408 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CSMD2Q7Z408 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSMD2Q7Z408 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSMD2Q7Z408 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSMD2Q7Z408 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSMD2Q7Z408 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CSMD2Q7Z408 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSMD2Q7Z408 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSMD2Q7Z408 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSMD2Q7Z408 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSMD2Q7Z408 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSMD2Q7Z408 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.71□□□□□ -0.05
CSMD2Q7Z408 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CSMD2Q7Z408 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CSMD2Q7Z408 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.71□□□□□ -0.06
CSMD2Q7Z408 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CSMD2Q7Z408 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
CSMD2Q7Z408 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CSMD2Q7Z408 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CSMD2Q7Z408 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.71□□□□□ -0.06
CSMD2Q7Z408 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.71□□□□□ -0.06
CSMD2Q7Z408 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD2Q7Z408 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD2Q7Z408 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CSMD2Q7Z408 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
CSMD2Q7Z408 AC073130.3-201ENST00000624389 2278 ntBASIC14.7□□□□□ -0.06
CSMD2Q7Z408 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.7□□□□□ -0.06
CSMD2Q7Z408 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.7□□□□□ -0.06
CSMD2Q7Z408 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD2Q7Z408 IGHV3-71-201ENST00000523324 359 ntBASIC14.7□□□□□ -0.06
CSMD2Q7Z408 ACTL9-202ENST00000612068 1252 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms