Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD3Q7Z3D4 AC011467.2-201ENST00000598425 242 ntBASIC17.74■□□□□ 0.43
LYSMD3Q7Z3D4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.74■□□□□ 0.43
LYSMD3Q7Z3D4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD3Q7Z3D4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.74■□□□□ 0.43
LYSMD3Q7Z3D4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD3Q7Z3D4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD3Q7Z3D4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 REXO1L11P-201ENST00000620964 1927 ntBASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 COX5BP2-201ENST00000392354 334 ntBASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 RCN1P2-201ENST00000398357 915 ntBASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 AL450487.1-201ENST00000426799 995 ntBASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 AC114341.1-201ENST00000618070 349 ntBASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD3Q7Z3D4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 AL355312.1-201ENST00000407115 2176 ntBASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 FAM220CP-201ENST00000395253 831 ntBASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 AC090340.1-201ENST00000620778 4980 ntBASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD3Q7Z3D4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
LYSMD3Q7Z3D4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD3Q7Z3D4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD3Q7Z3D4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD3Q7Z3D4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD3Q7Z3D4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD3Q7Z3D4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD3Q7Z3D4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD3Q7Z3D4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
LYSMD3Q7Z3D4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LYSMD3Q7Z3D4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD3Q7Z3D4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD3Q7Z3D4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
LYSMD3Q7Z3D4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD3Q7Z3D4 POM121L3P-201ENST00000419331 1163 ntBASIC17.71■□□□□ 0.43
LYSMD3Q7Z3D4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD3Q7Z3D4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms