Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00575Q6W349 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00575Q6W349 KRT16P5-201ENST00000455284 522 ntBASIC11.2□□□□□ -0.62
LINC00575Q6W349 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00575Q6W349 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC11.2□□□□□ -0.62
LINC00575Q6W349 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00575Q6W349 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC11.2□□□□□ -0.62
LINC00575Q6W349 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00575Q6W349 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00575Q6W349 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC11.2□□□□□ -0.62
LINC00575Q6W349 AC011298.2-201ENST00000617989 482 ntBASIC11.2□□□□□ -0.62
LINC00575Q6W349 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00575Q6W349 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00575Q6W349 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00575Q6W349 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
LINC00575Q6W349 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00575Q6W349 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00575Q6W349 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00575Q6W349 AC132938.6-201ENST00000623828 1655 ntBASIC11.2□□□□□ -0.62
LINC00575Q6W349 AC116353.5-201ENST00000638148 1699 ntBASIC11.2□□□□□ -0.62
LINC00575Q6W349 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00575Q6W349 TBC1D3P2-202ENST00000577902 1649 ntBASIC11.2□□□□□ -0.62
LINC00575Q6W349 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00575Q6W349 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
LINC00575Q6W349 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00575Q6W349 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00575Q6W349 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 CYP2T1P-202ENST00000641596 2535 ntBASIC11.19□□□□□ -0.62
LINC00575Q6W349 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
LINC00575Q6W349 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC00575Q6W349 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 RHBDF1P1-201ENST00000427504 1941 ntBASIC11.19□□□□□ -0.62
LINC00575Q6W349 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC00575Q6W349 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00575Q6W349 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00575Q6W349 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
LINC00575Q6W349 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
LINC00575Q6W349 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
LINC00575Q6W349 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00575Q6W349 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC11.19□□□□□ -0.62
LINC00575Q6W349 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
LINC00575Q6W349 MIR663A-201ENST00000385250 93 ntBASIC11.19□□□□□ -0.62
LINC00575Q6W349 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC00575Q6W349 PPP1R14BP5-201ENST00000440334 435 ntBASIC11.19□□□□□ -0.62
LINC00575Q6W349 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
LINC00575Q6W349 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
LINC00575Q6W349 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC11.19□□□□□ -0.62
LINC00575Q6W349 MIR3180-5-201ENST00000583743 153 ntBASIC11.19□□□□□ -0.62
LINC00575Q6W349 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC11.19□□□□□ -0.62
LINC00575Q6W349 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC00575Q6W349 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 AC022188.1-201ENST00000620960 1664 ntBASIC11.19□□□□□ -0.62
LINC00575Q6W349 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00575Q6W349 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
LINC00575Q6W349 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00575Q6W349 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
LINC00575Q6W349 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00575Q6W349 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00575Q6W349 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC00575Q6W349 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
LINC00575Q6W349 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
LINC00575Q6W349 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
LINC00575Q6W349 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00575Q6W349 HOXB1-202ENST00000577092 1414 ntBASIC11.18□□□□□ -0.62
LINC00575Q6W349 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00575Q6W349 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00575Q6W349 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00575Q6W349 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00575Q6W349 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms