Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PPP4R3AQ6IN85 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 AC067852.2-201ENST00000590513 2313 ntBASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 NUS1P2-201ENST00000417358 873 ntBASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 KRT18P31-201ENST00000506277 1292 ntBASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 AC019129.2-201ENST00000609837 1235 ntBASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 AL049757.1-201ENST00000616842 1596 ntBASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PPP4R3AQ6IN85 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 AL355312.1-201ENST00000407115 2176 ntBASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 AC002558.1-201ENST00000488906 803 ntBASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 AC012313.10-201ENST00000623509 926 ntBASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 PCDHB18P-201ENST00000524813 2368 ntBASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PPP4R3AQ6IN85 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 DUSP5P1-201ENST00000441325 1139 ntBASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 AL591684.3-201ENST00000605187 298 ntBASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms