Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TNNI3KQ59H18 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
TNNI3KQ59H18 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TNNI3KQ59H18 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
TNNI3KQ59H18 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TNNI3KQ59H18 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TNNI3KQ59H18 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
TNNI3KQ59H18 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TNNI3KQ59H18 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.48■■□□□ 1.03
TNNI3KQ59H18 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TNNI3KQ59H18 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
TNNI3KQ59H18 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TNNI3KQ59H18 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TNNI3KQ59H18 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TNNI3KQ59H18 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC21.48■■□□□ 1.03
TNNI3KQ59H18 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TNNI3KQ59H18 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC21.48■■□□□ 1.03
TNNI3KQ59H18 PRYP5-201ENST00000451909 266 ntBASIC21.48■■□□□ 1.03
TNNI3KQ59H18 AF186996.4-201ENST00000467186 377 ntBASIC21.48■■□□□ 1.03
TNNI3KQ59H18 AC073648.2-201ENST00000510116 352 ntBASIC21.48■■□□□ 1.03
TNNI3KQ59H18 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.48■■□□□ 1.03
TNNI3KQ59H18 AL139327.4-201ENST00000612362 153 ntBASIC21.48■■□□□ 1.03
TNNI3KQ59H18 AL022326.1-202ENST00000641533 845 ntBASIC21.48■■□□□ 1.03
TNNI3KQ59H18 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TNNI3KQ59H18 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TNNI3KQ59H18 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TNNI3KQ59H18 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.48■■□□□ 1.03
TNNI3KQ59H18 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TNNI3KQ59H18 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TNNI3KQ59H18 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TNNI3KQ59H18 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TNNI3KQ59H18 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC21.48■■□□□ 1.03
TNNI3KQ59H18 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TNNI3KQ59H18 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.48■■□□□ 1.03
TNNI3KQ59H18 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 HLA-A-201ENST00000376802 1334 ntBASIC21.47■■□□□ 1.03
TNNI3KQ59H18 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TNNI3KQ59H18 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TNNI3KQ59H18 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TNNI3KQ59H18 LYSMD4-203ENST00000378904 2122 ntBASIC21.46■■□□□ 1.03
TNNI3KQ59H18 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC21.46■■□□□ 1.03
TNNI3KQ59H18 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.46■■□□□ 1.03
TNNI3KQ59H18 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
TNNI3KQ59H18 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TNNI3KQ59H18 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
TNNI3KQ59H18 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TNNI3KQ59H18 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.46■■□□□ 1.03
TNNI3KQ59H18 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TNNI3KQ59H18 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
TNNI3KQ59H18 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC21.46■■□□□ 1.03
TNNI3KQ59H18 AL662844.1-201ENST00000546340 181 ntBASIC21.46■■□□□ 1.03
TNNI3KQ59H18 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC21.46■■□□□ 1.03
TNNI3KQ59H18 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.46■■□□□ 1.03
TNNI3KQ59H18 AL773604.1-201ENST00000617417 272 ntBASIC21.46■■□□□ 1.03
TNNI3KQ59H18 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC21.46■■□□□ 1.03
TNNI3KQ59H18 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.46■■□□□ 1.03
TNNI3KQ59H18 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.46■■□□□ 1.03
TNNI3KQ59H18 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
TNNI3KQ59H18 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.46■■□□□ 1.03
TNNI3KQ59H18 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
TNNI3KQ59H18 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TNNI3KQ59H18 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TNNI3KQ59H18 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TNNI3KQ59H18 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms