Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ATP13A4Q4VNC1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.39■□□□□ 0.53
ATP13A4Q4VNC1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.39■□□□□ 0.53
ATP13A4Q4VNC1 FAM86EP-206ENST00000510506 987 ntBASIC18.39■□□□□ 0.53
ATP13A4Q4VNC1 GUSBP12-201ENST00000513727 720 ntBASIC18.39■□□□□ 0.53
ATP13A4Q4VNC1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP13A4Q4VNC1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.39■□□□□ 0.53
ATP13A4Q4VNC1 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ATP13A4Q4VNC1 AL592071.1-201ENST00000611956 408 ntBASIC18.39■□□□□ 0.53
ATP13A4Q4VNC1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
ATP13A4Q4VNC1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ATP13A4Q4VNC1 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ATP13A4Q4VNC1 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.39■□□□□ 0.53
ATP13A4Q4VNC1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP13A4Q4VNC1 AC005332.1-201ENST00000577698 1310 ntBASIC18.39■□□□□ 0.53
ATP13A4Q4VNC1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP13A4Q4VNC1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP13A4Q4VNC1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
ATP13A4Q4VNC1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP13A4Q4VNC1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP13A4Q4VNC1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP13A4Q4VNC1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP13A4Q4VNC1 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.39■□□□□ 0.53
ATP13A4Q4VNC1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP13A4Q4VNC1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.39■□□□□ 0.53
ATP13A4Q4VNC1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 AC091607.1-201ENST00000490318 1060 ntBASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 AC005336.2-201ENST00000593183 939 ntBASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 AC097374.2-201ENST00000618617 1306 ntBASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP13A4Q4VNC1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 FAM210CP-201ENST00000445714 574 ntBASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 IGHV3-41-201ENST00000613121 348 ntBASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ATP13A4Q4VNC1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP13A4Q4VNC1 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP13A4Q4VNC1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP13A4Q4VNC1 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP13A4Q4VNC1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP13A4Q4VNC1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP13A4Q4VNC1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP13A4Q4VNC1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP13A4Q4VNC1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP13A4Q4VNC1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.36■□□□□ 0.53
ATP13A4Q4VNC1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP13A4Q4VNC1 COX5BP2-201ENST00000392354 334 ntBASIC18.36■□□□□ 0.53
ATP13A4Q4VNC1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP13A4Q4VNC1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP13A4Q4VNC1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP13A4Q4VNC1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms