Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 AC114341.1-201ENST00000618070 349 ntBASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 KRT8P10-201ENST00000450021 1447 ntBASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.55■□□□□ 0.56
PTPN20Q4JDL3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 AC108860.2-201ENST00000562760 2183 ntBASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 AL139327.4-201ENST00000612362 153 ntBASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN20Q4JDL3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN20Q4JDL3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN20Q4JDL3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN20Q4JDL3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN20Q4JDL3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PTPN20Q4JDL3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN20Q4JDL3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN20Q4JDL3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN20Q4JDL3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN20Q4JDL3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN20Q4JDL3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.53■□□□□ 0.56
PTPN20Q4JDL3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.53■□□□□ 0.56
PTPN20Q4JDL3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PTPN20Q4JDL3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.53■□□□□ 0.56
PTPN20Q4JDL3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.53■□□□□ 0.56
PTPN20Q4JDL3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.53■□□□□ 0.56
PTPN20Q4JDL3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.53■□□□□ 0.56
PTPN20Q4JDL3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PTPN20Q4JDL3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN20Q4JDL3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.53■□□□□ 0.56
PTPN20Q4JDL3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PTPN20Q4JDL3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN20Q4JDL3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN20Q4JDL3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.53■□□□□ 0.56
PTPN20Q4JDL3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN20Q4JDL3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN20Q4JDL3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.53■□□□□ 0.56
PTPN20Q4JDL3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN20Q4JDL3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN20Q4JDL3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN20Q4JDL3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN20Q4JDL3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PTPN20Q4JDL3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
PTPN20Q4JDL3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN20Q4JDL3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN20Q4JDL3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PTPN20Q4JDL3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.52■□□□□ 0.56
PTPN20Q4JDL3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN20Q4JDL3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
PTPN20Q4JDL3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN20Q4JDL3 NUS1P2-201ENST00000417358 873 ntBASIC18.52■□□□□ 0.56
PTPN20Q4JDL3 POM121L3P-201ENST00000419331 1163 ntBASIC18.52■□□□□ 0.56
PTPN20Q4JDL3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.52■□□□□ 0.56
PTPN20Q4JDL3 AC103564.2-201ENST00000432853 1299 ntBASIC18.52■□□□□ 0.56
PTPN20Q4JDL3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.52■□□□□ 0.56
PTPN20Q4JDL3 AC138894.3-201ENST00000603787 634 ntBASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms