Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
COL16A1Q07092 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
COL16A1Q07092 AC004945.1-201ENST00000416738 983 ntBASIC23.5■■□□□ 1.35
COL16A1Q07092 AC009477.1-201ENST00000452936 217 ntBASIC23.5■■□□□ 1.35
COL16A1Q07092 DUTP2-201ENST00000519164 463 ntBASIC23.5■■□□□ 1.35
COL16A1Q07092 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC23.5■■□□□ 1.35
COL16A1Q07092 SSH2-210ENST00000582084 560 ntTSL 3 BASIC23.5■■□□□ 1.35
COL16A1Q07092 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL16A1Q07092 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.5■■□□□ 1.35
COL16A1Q07092 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL16A1Q07092 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL16A1Q07092 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC23.49■■□□□ 1.35
COL16A1Q07092 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL16A1Q07092 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC23.49■■□□□ 1.35
COL16A1Q07092 FLYWCH1P1-201ENST00000460917 1874 ntBASIC23.49■■□□□ 1.35
COL16A1Q07092 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL16A1Q07092 AC119751.2-201ENST00000504529 210 ntBASIC23.49■■□□□ 1.35
COL16A1Q07092 IGHV3-62-201ENST00000520057 340 ntBASIC23.49■■□□□ 1.35
COL16A1Q07092 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC23.49■■□□□ 1.35
COL16A1Q07092 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC23.49■■□□□ 1.35
COL16A1Q07092 AL009183.1-201ENST00000603760 355 ntBASIC23.49■■□□□ 1.35
COL16A1Q07092 COQ4-205ENST00000609948 956 ntTSL 2 BASIC23.49■■□□□ 1.35
COL16A1Q07092 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL16A1Q07092 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC23.49■■□□□ 1.35
COL16A1Q07092 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC23.49■■□□□ 1.35
COL16A1Q07092 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL16A1Q07092 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL16A1Q07092 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL16A1Q07092 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL16A1Q07092 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
COL16A1Q07092 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.48■■□□□ 1.35
COL16A1Q07092 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC23.48■■□□□ 1.35
COL16A1Q07092 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC23.48■■□□□ 1.35
COL16A1Q07092 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
COL16A1Q07092 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL16A1Q07092 NAA38-206ENST00000576384 424 ntTSL 2 BASIC23.48■■□□□ 1.35
COL16A1Q07092 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC23.48■■□□□ 1.35
COL16A1Q07092 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC23.48■■□□□ 1.35
COL16A1Q07092 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
COL16A1Q07092 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
COL16A1Q07092 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC23.48■■□□□ 1.35
COL16A1Q07092 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
COL16A1Q07092 AC093484.2-201ENST00000580996 2166 ntBASIC23.48■■□□□ 1.35
COL16A1Q07092 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC23.48■■□□□ 1.35
COL16A1Q07092 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
COL16A1Q07092 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
COL16A1Q07092 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC23.48■■□□□ 1.35
COL16A1Q07092 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC23.48■■□□□ 1.35
COL16A1Q07092 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL16A1Q07092 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC23.48■■□□□ 1.35
COL16A1Q07092 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
COL16A1Q07092 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
COL16A1Q07092 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC23.48■■□□□ 1.35
COL16A1Q07092 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC23.48■■□□□ 1.35
COL16A1Q07092 REEP4-207ENST00000523293 913 ntTSL 3 BASIC23.48■■□□□ 1.35
COL16A1Q07092 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
COL16A1Q07092 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
COL16A1Q07092 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL16A1Q07092 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL16A1Q07092 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL16A1Q07092 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC23.47■■□□□ 1.35
COL16A1Q07092 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL16A1Q07092 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL16A1Q07092 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC23.47■■□□□ 1.35
COL16A1Q07092 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL16A1Q07092 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL16A1Q07092 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC23.47■■□□□ 1.35
COL16A1Q07092 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC23.47■■□□□ 1.35
COL16A1Q07092 LY6E-204ENST00000519546 971 ntTSL 2 BASIC23.47■■□□□ 1.35
COL16A1Q07092 IGHV3-52-201ENST00000519770 353 ntBASIC23.47■■□□□ 1.35
COL16A1Q07092 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
COL16A1Q07092 MMP17-203ENST00000535004 719 ntTSL 3 BASIC23.47■■□□□ 1.35
COL16A1Q07092 AP000842.3-202ENST00000569238 1080 ntBASIC23.47■■□□□ 1.35
COL16A1Q07092 MIR4453-201ENST00000584019 89 ntBASIC23.47■■□□□ 1.35
COL16A1Q07092 AL162274.1-201ENST00000617191 1098 ntBASIC23.47■■□□□ 1.35
COL16A1Q07092 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
COL16A1Q07092 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC23.47■■□□□ 1.35
COL16A1Q07092 AC093677.2-201ENST00000600169 1863 ntBASIC23.47■■□□□ 1.35
COL16A1Q07092 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
COL16A1Q07092 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
COL16A1Q07092 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
COL16A1Q07092 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
COL16A1Q07092 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC23.46■■□□□ 1.35
COL16A1Q07092 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
COL16A1Q07092 MIR658-201ENST00000385210 100 ntBASIC23.46■■□□□ 1.35
COL16A1Q07092 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
COL16A1Q07092 AC112492.5-201ENST00000421897 457 ntBASIC23.46■■□□□ 1.35
COL16A1Q07092 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC23.46■■□□□ 1.35
COL16A1Q07092 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC23.46■■□□□ 1.35
COL16A1Q07092 INE1-201ENST00000456273 945 ntBASIC23.46■■□□□ 1.35
COL16A1Q07092 SATB1-217ENST00000493952 626 ntTSL 3 BASIC23.46■■□□□ 1.35
COL16A1Q07092 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC23.46■■□□□ 1.35
COL16A1Q07092 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC23.46■■□□□ 1.35
COL16A1Q07092 AC027369.6-201ENST00000525520 931 ntBASIC23.46■■□□□ 1.35
COL16A1Q07092 POLE2-203ENST00000553805 496 ntTSL 2 BASIC23.46■■□□□ 1.35
COL16A1Q07092 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC23.46■■□□□ 1.35
COL16A1Q07092 SPTSSB-204ENST00000617024 1292 ntBASIC23.46■■□□□ 1.35
COL16A1Q07092 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC23.46■■□□□ 1.35
COL16A1Q07092 ME2-218ENST00000640965 2476 ntTSL 5 BASIC23.46■■□□□ 1.35
COL16A1Q07092 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms