Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 AC010460.3-201ENST00000511359 1579 ntBASIC19.7■□□□□ 0.74
ASIC1P78348 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ASIC1P78348 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ASIC1P78348 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ASIC1P78348 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.7■□□□□ 0.74
ASIC1P78348 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
ASIC1P78348 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ASIC1P78348 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.7■□□□□ 0.74
ASIC1P78348 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ASIC1P78348 BX276092.5-203ENST00000456199 560 ntBASIC19.7■□□□□ 0.74
ASIC1P78348 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ASIC1P78348 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.7■□□□□ 0.74
ASIC1P78348 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ASIC1P78348 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ASIC1P78348 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ASIC1P78348 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ASIC1P78348 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ASIC1P78348 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ASIC1P78348 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.69■□□□□ 0.74
ASIC1P78348 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.69■□□□□ 0.74
ASIC1P78348 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ASIC1P78348 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ASIC1P78348 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ASIC1P78348 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
ASIC1P78348 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ASIC1P78348 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ASIC1P78348 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ASIC1P78348 AC108860.2-201ENST00000562760 2183 ntBASIC19.69■□□□□ 0.74
ASIC1P78348 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.69■□□□□ 0.74
ASIC1P78348 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ASIC1P78348 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ASIC1P78348 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ASIC1P78348 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.69■□□□□ 0.74
ASIC1P78348 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ASIC1P78348 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ASIC1P78348 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ASIC1P78348 AC011840.4-201ENST00000578471 627 ntBASIC19.69■□□□□ 0.74
ASIC1P78348 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.69■□□□□ 0.74
ASIC1P78348 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.69■□□□□ 0.74
ASIC1P78348 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.69■□□□□ 0.74
ASIC1P78348 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ASIC1P78348 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ASIC1P78348 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ASIC1P78348 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ASIC1P78348 CROCCP2-202ENST00000412962 2773 ntBASIC19.69■□□□□ 0.74
ASIC1P78348 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ASIC1P78348 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ASIC1P78348 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.69■□□□□ 0.74
ASIC1P78348 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
ASIC1P78348 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.69■□□□□ 0.74
ASIC1P78348 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ASIC1P78348 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ASIC1P78348 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ASIC1P78348 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ASIC1P78348 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ASIC1P78348 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ASIC1P78348 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ASIC1P78348 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ASIC1P78348 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ASIC1P78348 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ASIC1P78348 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ASIC1P78348 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ASIC1P78348 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.68■□□□□ 0.74
ASIC1P78348 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ASIC1P78348 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ASIC1P78348 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ASIC1P78348 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.68■□□□□ 0.74
ASIC1P78348 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ASIC1P78348 PCED1CP-201ENST00000419887 785 ntBASIC19.68■□□□□ 0.74
ASIC1P78348 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.68■□□□□ 0.74
ASIC1P78348 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.68■□□□□ 0.74
ASIC1P78348 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ASIC1P78348 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ASIC1P78348 AC116407.4-201ENST00000623319 1061 ntBASIC19.68■□□□□ 0.74
ASIC1P78348 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ASIC1P78348 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.68■□□□□ 0.74
ASIC1P78348 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.68■□□□□ 0.74
ASIC1P78348 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ASIC1P78348 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ASIC1P78348 AL023806.1-201ENST00000603994 1649 ntBASIC19.68■□□□□ 0.74
ASIC1P78348 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ASIC1P78348 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.68■□□□□ 0.74
ASIC1P78348 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ASIC1P78348 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ASIC1P78348 AC016734.2-201ENST00000624325 1377 ntBASIC19.68■□□□□ 0.74
ASIC1P78348 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ASIC1P78348 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ASIC1P78348 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ASIC1P78348 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.68■□□□□ 0.74
ASIC1P78348 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ASIC1P78348 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ASIC1P78348 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ASIC1P78348 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ASIC1P78348 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ASIC1P78348 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ASIC1P78348 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ASIC1P78348 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
ASIC1P78348 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ASIC1P78348 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ASIC1P78348 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms