Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.17□□□□□ -0.14
PAX9P55771 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PAX9P55771 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PAX9P55771 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.17□□□□□ -0.14
PAX9P55771 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.17□□□□□ -0.14
PAX9P55771 AC005104.2-201ENST00000427818 678 ntBASIC14.17□□□□□ -0.14
PAX9P55771 SLC25A1P2-201ENST00000430693 912 ntBASIC14.17□□□□□ -0.14
PAX9P55771 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PAX9P55771 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.17□□□□□ -0.14
PAX9P55771 AL355355.2-201ENST00000442321 338 ntBASIC14.17□□□□□ -0.14
PAX9P55771 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.17□□□□□ -0.14
PAX9P55771 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.17□□□□□ -0.14
PAX9P55771 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.17□□□□□ -0.14
PAX9P55771 SEC1P-202ENST00000473944 940 ntBASIC14.17□□□□□ -0.14
PAX9P55771 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.17□□□□□ -0.14
PAX9P55771 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.17□□□□□ -0.14
PAX9P55771 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.17□□□□□ -0.14
PAX9P55771 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.17□□□□□ -0.14
PAX9P55771 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.17□□□□□ -0.14
PAX9P55771 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PAX9P55771 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PAX9P55771 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.17□□□□□ -0.14
PAX9P55771 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PAX9P55771 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PAX9P55771 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PAX9P55771 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PAX9P55771 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.17□□□□□ -0.14
PAX9P55771 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PAX9P55771 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.17□□□□□ -0.14
PAX9P55771 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.17□□□□□ -0.14
PAX9P55771 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PAX9P55771 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.17□□□□□ -0.14
PAX9P55771 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.17□□□□□ -0.14
PAX9P55771 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PAX9P55771 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PAX9P55771 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PAX9P55771 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PAX9P55771 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.16□□□□□ -0.14
PAX9P55771 AL391005.1-201ENST00000623953 2435 ntBASIC14.16□□□□□ -0.14
PAX9P55771 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
PAX9P55771 AC078925.2-201ENST00000624013 1973 ntBASIC14.16□□□□□ -0.14
PAX9P55771 AC006449.5-201ENST00000610658 2098 ntBASIC14.16□□□□□ -0.14
PAX9P55771 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
PAX9P55771 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PAX9P55771 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PAX9P55771 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PAX9P55771 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.16□□□□□ -0.14
PAX9P55771 AC011270.2-201ENST00000624293 2550 ntBASIC14.16□□□□□ -0.14
PAX9P55771 AC092053.1-201ENST00000605787 1936 ntBASIC14.16□□□□□ -0.14
PAX9P55771 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PAX9P55771 PRORSD1P-201ENST00000295112 541 ntBASIC14.16□□□□□ -0.14
PAX9P55771 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PAX9P55771 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.16□□□□□ -0.14
PAX9P55771 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.16□□□□□ -0.14
PAX9P55771 SLC25A1P3-201ENST00000395415 828 ntBASIC14.16□□□□□ -0.14
PAX9P55771 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PAX9P55771 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PAX9P55771 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PAX9P55771 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PAX9P55771 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PAX9P55771 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.16□□□□□ -0.14
PAX9P55771 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.16□□□□□ -0.14
PAX9P55771 AP005242.2-201ENST00000580065 1175 ntBASIC14.16□□□□□ -0.14
PAX9P55771 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PAX9P55771 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.16□□□□□ -0.14
PAX9P55771 REXO1L10P-201ENST00000615707 1290 ntBASIC14.16□□□□□ -0.14
PAX9P55771 REXO1L12P-201ENST00000622156 912 ntBASIC14.16□□□□□ -0.14
PAX9P55771 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PAX9P55771 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PAX9P55771 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PAX9P55771 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PAX9P55771 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.16□□□□□ -0.14
PAX9P55771 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PAX9P55771 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.16□□□□□ -0.14
PAX9P55771 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.16□□□□□ -0.14
PAX9P55771 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.16□□□□□ -0.14
PAX9P55771 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PAX9P55771 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.16□□□□□ -0.14
PAX9P55771 AC092171.3-201ENST00000610122 2651 ntBASIC14.16□□□□□ -0.14
PAX9P55771 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.16□□□□□ -0.14
PAX9P55771 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PAX9P55771 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
PAX9P55771 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PAX9P55771 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PAX9P55771 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PAX9P55771 AC092338.2-201ENST00000568827 1415 ntBASIC14.15□□□□□ -0.14
PAX9P55771 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.15□□□□□ -0.14
PAX9P55771 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PAX9P55771 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PAX9P55771 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PAX9P55771 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PAX9P55771 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PAX9P55771 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PAX9P55771 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PAX9P55771 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PAX9P55771 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PAX9P55771 PCDHB17P-201ENST00000539533 2393 ntBASIC14.15□□□□□ -0.14
PAX9P55771 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.15□□□□□ -0.14
PAX9P55771 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PAX9P55771 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms