Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
ATN1P54259 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.36■□□□□ 0.69
ATN1P54259 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.36■□□□□ 0.69
ATN1P54259 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATN1P54259 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATN1P54259 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
ATN1P54259 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.36■□□□□ 0.69
ATN1P54259 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATN1P54259 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.36■□□□□ 0.69
ATN1P54259 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATN1P54259 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.35■□□□□ 0.69
ATN1P54259 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATN1P54259 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATN1P54259 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.35■□□□□ 0.69
ATN1P54259 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATN1P54259 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.35■□□□□ 0.69
ATN1P54259 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATN1P54259 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATN1P54259 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
ATN1P54259 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
ATN1P54259 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATN1P54259 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATN1P54259 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATN1P54259 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.35■□□□□ 0.69
ATN1P54259 LINC00982-205ENST00000420957 435 ntBASIC19.35■□□□□ 0.69
ATN1P54259 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.35■□□□□ 0.69
ATN1P54259 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
ATN1P54259 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.35■□□□□ 0.69
ATN1P54259 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.35■□□□□ 0.69
ATN1P54259 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.35■□□□□ 0.69
ATN1P54259 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
ATN1P54259 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATN1P54259 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATN1P54259 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATN1P54259 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATN1P54259 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATN1P54259 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATN1P54259 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATN1P54259 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
ATN1P54259 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ATN1P54259 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.35■□□□□ 0.69
ATN1P54259 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
ATN1P54259 PHGDH-209ENST00000641074 1780 ntBASIC19.34■□□□□ 0.69
ATN1P54259 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
ATN1P54259 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATN1P54259 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.34■□□□□ 0.69
ATN1P54259 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ATN1P54259 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATN1P54259 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATN1P54259 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATN1P54259 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ATN1P54259 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.34■□□□□ 0.69
ATN1P54259 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.34■□□□□ 0.69
ATN1P54259 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATN1P54259 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.34■□□□□ 0.69
ATN1P54259 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.34■□□□□ 0.69
ATN1P54259 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.34■□□□□ 0.69
ATN1P54259 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATN1P54259 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.34■□□□□ 0.69
ATN1P54259 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATN1P54259 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATN1P54259 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATN1P54259 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
ATN1P54259 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATN1P54259 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATN1P54259 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATN1P54259 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATN1P54259 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATN1P54259 AC093010.1-201ENST00000473625 1624 ntBASIC19.33■□□□□ 0.69
ATN1P54259 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ATN1P54259 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.33■□□□□ 0.69
ATN1P54259 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATN1P54259 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATN1P54259 Z97985.1-201ENST00000332270 946 ntBASIC19.33■□□□□ 0.68
ATN1P54259 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ATN1P54259 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATN1P54259 GK-202ENST00000378941 458 ntTSL 3 BASIC19.33■□□□□ 0.68
ATN1P54259 AC236430.1-201ENST00000402231 743 ntBASIC19.33■□□□□ 0.68
ATN1P54259 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.33■□□□□ 0.68
ATN1P54259 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.33■□□□□ 0.68
ATN1P54259 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
ATN1P54259 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
ATN1P54259 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.33■□□□□ 0.68
ATN1P54259 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.33■□□□□ 0.68
ATN1P54259 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ATN1P54259 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATN1P54259 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
ATN1P54259 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.33■□□□□ 0.68
ATN1P54259 AC005332.7-201ENST00000614046 2005 ntBASIC19.33■□□□□ 0.68
ATN1P54259 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATN1P54259 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATN1P54259 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATN1P54259 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
ATN1P54259 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATN1P54259 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATN1P54259 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ATN1P54259 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATN1P54259 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
ATN1P54259 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATN1P54259 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms