Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LIMK2P53671 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
LIMK2P53671 PCDHA12-202ENST00000613593 2588 ntBASIC17.8■□□□□ 0.44
LIMK2P53671 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.8■□□□□ 0.44
LIMK2P53671 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.8■□□□□ 0.44
LIMK2P53671 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.8■□□□□ 0.44
LIMK2P53671 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.8■□□□□ 0.44
LIMK2P53671 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
LIMK2P53671 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.8■□□□□ 0.44
LIMK2P53671 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.8■□□□□ 0.44
LIMK2P53671 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.8■□□□□ 0.44
LIMK2P53671 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
LIMK2P53671 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LIMK2P53671 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
LIMK2P53671 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
LIMK2P53671 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.8■□□□□ 0.44
LIMK2P53671 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LIMK2P53671 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIMK2P53671 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
LIMK2P53671 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIMK2P53671 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIMK2P53671 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIMK2P53671 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIMK2P53671 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIMK2P53671 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LIMK2P53671 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
LIMK2P53671 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIMK2P53671 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LIMK2P53671 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LIMK2P53671 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LIMK2P53671 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.79■□□□□ 0.44
LIMK2P53671 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LIMK2P53671 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.79■□□□□ 0.44
LIMK2P53671 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.79■□□□□ 0.44
LIMK2P53671 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.79■□□□□ 0.44
LIMK2P53671 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LIMK2P53671 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
LIMK2P53671 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.79■□□□□ 0.44
LIMK2P53671 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LIMK2P53671 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LIMK2P53671 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.79■□□□□ 0.44
LIMK2P53671 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.79■□□□□ 0.44
LIMK2P53671 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.79■□□□□ 0.44
LIMK2P53671 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LIMK2P53671 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.79■□□□□ 0.44
LIMK2P53671 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.79■□□□□ 0.44
LIMK2P53671 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.79■□□□□ 0.44
LIMK2P53671 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LIMK2P53671 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LIMK2P53671 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LIMK2P53671 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LIMK2P53671 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LIMK2P53671 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LIMK2P53671 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.79■□□□□ 0.44
LIMK2P53671 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.79■□□□□ 0.44
LIMK2P53671 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.79■□□□□ 0.44
LIMK2P53671 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.79■□□□□ 0.44
LIMK2P53671 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LIMK2P53671 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LIMK2P53671 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LIMK2P53671 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LIMK2P53671 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LIMK2P53671 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LIMK2P53671 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LIMK2P53671 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LIMK2P53671 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LIMK2P53671 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
LIMK2P53671 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LIMK2P53671 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LIMK2P53671 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LIMK2P53671 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LIMK2P53671 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LIMK2P53671 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.78■□□□□ 0.44
LIMK2P53671 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.78■□□□□ 0.44
LIMK2P53671 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LIMK2P53671 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
LIMK2P53671 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.78■□□□□ 0.44
LIMK2P53671 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.78■□□□□ 0.44
LIMK2P53671 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.78■□□□□ 0.44
LIMK2P53671 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.78■□□□□ 0.44
LIMK2P53671 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.78■□□□□ 0.44
LIMK2P53671 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LIMK2P53671 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
LIMK2P53671 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LIMK2P53671 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LIMK2P53671 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LIMK2P53671 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LIMK2P53671 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LIMK2P53671 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
LIMK2P53671 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
LIMK2P53671 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LIMK2P53671 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LIMK2P53671 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
LIMK2P53671 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.77■□□□□ 0.44
LIMK2P53671 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.77■□□□□ 0.44
LIMK2P53671 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LIMK2P53671 AC106820.2-201ENST00000563775 3264 ntBASIC17.77■□□□□ 0.44
LIMK2P53671 Z83836.1-201ENST00000624605 1642 ntBASIC17.77■□□□□ 0.44
LIMK2P53671 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
LIMK2P53671 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms