Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
MTHFRP42898 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.41■□□□□ 0.54
MTHFRP42898 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
MTHFRP42898 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MTHFRP42898 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.4■□□□□ 0.54
MTHFRP42898 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MTHFRP42898 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MTHFRP42898 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MTHFRP42898 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MTHFRP42898 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MTHFRP42898 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MTHFRP42898 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MTHFRP42898 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.4■□□□□ 0.54
MTHFRP42898 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.4■□□□□ 0.54
MTHFRP42898 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
MTHFRP42898 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MTHFRP42898 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.4■□□□□ 0.54
MTHFRP42898 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.4■□□□□ 0.54
MTHFRP42898 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
MTHFRP42898 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.4■□□□□ 0.54
MTHFRP42898 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.4■□□□□ 0.54
MTHFRP42898 AC005082.1-201ENST00000413042 2259 ntBASIC18.4■□□□□ 0.54
MTHFRP42898 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MTHFRP42898 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.4■□□□□ 0.54
MTHFRP42898 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MTHFRP42898 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MTHFRP42898 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
MTHFRP42898 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
MTHFRP42898 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MTHFRP42898 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MTHFRP42898 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
MTHFRP42898 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MTHFRP42898 LETM1P2-201ENST00000597330 2178 ntBASIC18.4■□□□□ 0.54
MTHFRP42898 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
MTHFRP42898 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.39■□□□□ 0.54
MTHFRP42898 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
MTHFRP42898 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
MTHFRP42898 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
MTHFRP42898 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MTHFRP42898 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
MTHFRP42898 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.39■□□□□ 0.53
MTHFRP42898 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MTHFRP42898 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MTHFRP42898 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
MTHFRP42898 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MTHFRP42898 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MTHFRP42898 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
MTHFRP42898 MRPL20P1-201ENST00000400819 433 ntBASIC18.39■□□□□ 0.53
MTHFRP42898 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.39■□□□□ 0.53
MTHFRP42898 KLF4P1-201ENST00000412782 1185 ntBASIC18.39■□□□□ 0.53
MTHFRP42898 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.39■□□□□ 0.53
MTHFRP42898 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MTHFRP42898 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.39■□□□□ 0.53
MTHFRP42898 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
MTHFRP42898 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.39■□□□□ 0.53
MTHFRP42898 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.39■□□□□ 0.53
MTHFRP42898 PDPK2P-202ENST00000562415 1191 ntBASIC18.39■□□□□ 0.53
MTHFRP42898 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
MTHFRP42898 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
MTHFRP42898 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MTHFRP42898 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MTHFRP42898 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
MTHFRP42898 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.39■□□□□ 0.53
MTHFRP42898 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
MTHFRP42898 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MTHFRP42898 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MTHFRP42898 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.39■□□□□ 0.53
MTHFRP42898 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MTHFRP42898 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MTHFRP42898 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MTHFRP42898 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MTHFRP42898 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.39■□□□□ 0.53
MTHFRP42898 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.39■□□□□ 0.53
MTHFRP42898 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MTHFRP42898 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.38■□□□□ 0.53
MTHFRP42898 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MTHFRP42898 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MTHFRP42898 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
MTHFRP42898 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
MTHFRP42898 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
MTHFRP42898 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
MTHFRP42898 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
MTHFRP42898 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MTHFRP42898 AC003669.1-201ENST00000334569 611 ntBASIC18.38■□□□□ 0.53
MTHFRP42898 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MTHFRP42898 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
MTHFRP42898 ACTG1P14-201ENST00000446382 1122 ntBASIC18.38■□□□□ 0.53
MTHFRP42898 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.38■□□□□ 0.53
MTHFRP42898 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
MTHFRP42898 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.38■□□□□ 0.53
MTHFRP42898 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
MTHFRP42898 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.38■□□□□ 0.53
MTHFRP42898 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.38■□□□□ 0.53
MTHFRP42898 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.38■□□□□ 0.53
MTHFRP42898 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.38■□□□□ 0.53
MTHFRP42898 AL805961.1-202ENST00000641562 540 ntBASIC18.38■□□□□ 0.53
MTHFRP42898 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MTHFRP42898 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MTHFRP42898 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.38■□□□□ 0.53
MTHFRP42898 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms