Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCNFP41002 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.77■□□□□ 0.44
CCNFP41002 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.77■□□□□ 0.44
CCNFP41002 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CCNFP41002 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.77■□□□□ 0.44
CCNFP41002 AC116407.2-201ENST00000613639 860 ntBASIC17.77■□□□□ 0.44
CCNFP41002 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCNFP41002 LINC01311-201ENST00000565162 1445 ntBASIC17.77■□□□□ 0.44
CCNFP41002 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.77■□□□□ 0.44
CCNFP41002 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCNFP41002 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CCNFP41002 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CCNFP41002 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCNFP41002 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CCNFP41002 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CCNFP41002 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCNFP41002 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCNFP41002 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCNFP41002 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CCNFP41002 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CCNFP41002 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CCNFP41002 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CCNFP41002 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.76■□□□□ 0.43
CCNFP41002 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
CCNFP41002 HTR7P1-202ENST00000624664 4411 ntBASIC17.76■□□□□ 0.43
CCNFP41002 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCNFP41002 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCNFP41002 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.76■□□□□ 0.43
CCNFP41002 AL671277.2-201ENST00000458060 996 ntBASIC17.76■□□□□ 0.43
CCNFP41002 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.76■□□□□ 0.43
CCNFP41002 AC092597.1-201ENST00000487352 616 ntBASIC17.76■□□□□ 0.43
CCNFP41002 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCNFP41002 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.76■□□□□ 0.43
CCNFP41002 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.76■□□□□ 0.43
CCNFP41002 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.76■□□□□ 0.43
CCNFP41002 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.76■□□□□ 0.43
CCNFP41002 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.76■□□□□ 0.43
CCNFP41002 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.76■□□□□ 0.43
CCNFP41002 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.76■□□□□ 0.43
CCNFP41002 HYMAI.1-201ENST00000620949 238 ntBASIC17.76■□□□□ 0.43
CCNFP41002 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.76■□□□□ 0.43
CCNFP41002 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCNFP41002 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCNFP41002 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.76■□□□□ 0.43
CCNFP41002 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
CCNFP41002 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
CCNFP41002 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCNFP41002 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.75■□□□□ 0.43
CCNFP41002 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCNFP41002 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCNFP41002 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNFP41002 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCNFP41002 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNFP41002 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNFP41002 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
CCNFP41002 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNFP41002 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNFP41002 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.75■□□□□ 0.43
CCNFP41002 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.75■□□□□ 0.43
CCNFP41002 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.75■□□□□ 0.43
CCNFP41002 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNFP41002 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCNFP41002 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.75■□□□□ 0.43
CCNFP41002 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCNFP41002 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNFP41002 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNFP41002 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.75■□□□□ 0.43
CCNFP41002 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.75■□□□□ 0.43
CCNFP41002 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCNFP41002 AC113404.2-201ENST00000507884 177 ntBASIC17.75■□□□□ 0.43
CCNFP41002 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.75■□□□□ 0.43
CCNFP41002 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.75■□□□□ 0.43
CCNFP41002 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCNFP41002 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCNFP41002 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNFP41002 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNFP41002 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.75■□□□□ 0.43
CCNFP41002 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCNFP41002 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
CCNFP41002 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNFP41002 AL118508.1-201ENST00000613502 2345 ntBASIC17.75■□□□□ 0.43
CCNFP41002 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.75■□□□□ 0.43
CCNFP41002 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.74■□□□□ 0.43
CCNFP41002 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCNFP41002 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNFP41002 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
CCNFP41002 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNFP41002 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNFP41002 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNFP41002 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNFP41002 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNFP41002 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNFP41002 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNFP41002 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNFP41002 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNFP41002 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNFP41002 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.74■□□□□ 0.43
CCNFP41002 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.74■□□□□ 0.43
CCNFP41002 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.74■□□□□ 0.43
CCNFP41002 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms