Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
KRT20P35900 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT20P35900 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT20P35900 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT20P35900 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT20P35900 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT20P35900 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT20P35900 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT20P35900 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT20P35900 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT20P35900 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT20P35900 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT20P35900 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT20P35900 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT20P35900 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
KRT20P35900 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT20P35900 HLA-F-220ENST00000434407 884 ntBASIC16.81■□□□□ 0.28
KRT20P35900 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT20P35900 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.81■□□□□ 0.28
KRT20P35900 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT20P35900 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.81■□□□□ 0.28
KRT20P35900 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.81■□□□□ 0.28
KRT20P35900 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
KRT20P35900 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.81■□□□□ 0.28
KRT20P35900 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT20P35900 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.81■□□□□ 0.28
KRT20P35900 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT20P35900 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT20P35900 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT20P35900 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
KRT20P35900 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT20P35900 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT20P35900 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT20P35900 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT20P35900 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT20P35900 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
KRT20P35900 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT20P35900 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
KRT20P35900 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT20P35900 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT20P35900 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT20P35900 MIR1224-201ENST00000408193 85 ntBASIC16.8■□□□□ 0.28
KRT20P35900 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT20P35900 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
KRT20P35900 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.8■□□□□ 0.28
KRT20P35900 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT20P35900 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.8■□□□□ 0.28
KRT20P35900 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT20P35900 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT20P35900 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT20P35900 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT20P35900 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
KRT20P35900 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT20P35900 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT20P35900 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT20P35900 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT20P35900 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
KRT20P35900 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
KRT20P35900 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT20P35900 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT20P35900 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT20P35900 AC022211.2-201ENST00000585075 2527 ntBASIC16.79■□□□□ 0.28
KRT20P35900 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT20P35900 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT20P35900 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT20P35900 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT20P35900 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT20P35900 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT20P35900 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT20P35900 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT20P35900 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT20P35900 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT20P35900 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT20P35900 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT20P35900 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT20P35900 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT20P35900 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.79■□□□□ 0.28
KRT20P35900 AP003733.1-201ENST00000491725 852 ntBASIC16.79■□□□□ 0.28
KRT20P35900 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.79■□□□□ 0.28
KRT20P35900 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.79■□□□□ 0.28
KRT20P35900 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.79■□□□□ 0.28
KRT20P35900 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT20P35900 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
KRT20P35900 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.79■□□□□ 0.28
KRT20P35900 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT20P35900 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT20P35900 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
KRT20P35900 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.79■□□□□ 0.28
KRT20P35900 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT20P35900 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT20P35900 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT20P35900 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT20P35900 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT20P35900 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT20P35900 KRT89P-201ENST00000620027 1478 ntBASIC16.79■□□□□ 0.28
KRT20P35900 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT20P35900 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT20P35900 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.78■□□□□ 0.28
KRT20P35900 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.78■□□□□ 0.28
KRT20P35900 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms