Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXC12P31275 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.66■□□□□ 0.1
HOXC12P31275 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.66■□□□□ 0.1
HOXC12P31275 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC12P31275 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXC12P31275 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXC12P31275 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.66■□□□□ 0.1
HOXC12P31275 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.66■□□□□ 0.1
HOXC12P31275 AC009533.2-201ENST00000543664 586 ntBASIC15.66■□□□□ 0.1
HOXC12P31275 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXC12P31275 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.66■□□□□ 0.1
HOXC12P31275 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.66■□□□□ 0.1
HOXC12P31275 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.66■□□□□ 0.1
HOXC12P31275 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.66■□□□□ 0.1
HOXC12P31275 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC12P31275 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC12P31275 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC12P31275 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXC12P31275 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.66■□□□□ 0.1
HOXC12P31275 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC12P31275 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXC12P31275 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC12P31275 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC12P31275 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC12P31275 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC12P31275 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
HOXC12P31275 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HOXC12P31275 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXC12P31275 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC12P31275 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC12P31275 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC12P31275 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC12P31275 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HOXC12P31275 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC12P31275 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.65■□□□□ 0.1
HOXC12P31275 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.65■□□□□ 0.1
HOXC12P31275 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXC12P31275 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HOXC12P31275 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
HOXC12P31275 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HOXC12P31275 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HOXC12P31275 MIR1233-2-201ENST00000408138 82 ntBASIC15.65■□□□□ 0.1
HOXC12P31275 MIR1233-1-201ENST00000408722 82 ntBASIC15.65■□□□□ 0.1
HOXC12P31275 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXC12P31275 SLC25A1P1-201ENST00000528351 927 ntBASIC15.65■□□□□ 0.1
HOXC12P31275 AC092865.5-201ENST00000545435 363 ntBASIC15.65■□□□□ 0.1
HOXC12P31275 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.65■□□□□ 0.1
HOXC12P31275 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.65■□□□□ 0.1
HOXC12P31275 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC12P31275 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXC12P31275 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.65■□□□□ 0.1
HOXC12P31275 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC12P31275 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC12P31275 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.65■□□□□ 0.1
HOXC12P31275 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXC12P31275 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HOXC12P31275 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC12P31275 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC12P31275 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.65■□□□□ 0.1
HOXC12P31275 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HOXC12P31275 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC12P31275 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC12P31275 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC12P31275 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXC12P31275 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC12P31275 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXC12P31275 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC12P31275 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
HOXC12P31275 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.64■□□□□ 0.09
HOXC12P31275 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC12P31275 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC12P31275 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC12P31275 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC12P31275 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.64■□□□□ 0.09
HOXC12P31275 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC12P31275 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC12P31275 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC12P31275 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
HOXC12P31275 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
HOXC12P31275 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC12P31275 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC12P31275 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC12P31275 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC12P31275 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC12P31275 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC12P31275 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC12P31275 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC12P31275 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC12P31275 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC12P31275 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC12P31275 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC12P31275 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC12P31275 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
HOXC12P31275 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC12P31275 POM121L3P-201ENST00000419331 1163 ntBASIC15.64■□□□□ 0.09
HOXC12P31275 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.64■□□□□ 0.09
HOXC12P31275 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.64■□□□□ 0.09
HOXC12P31275 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC12P31275 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.64■□□□□ 0.09
HOXC12P31275 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms