Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
HOXA11P31270 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19■□□□□ 0.63
HOXA11P31270 LINC00982-205ENST00000420957 435 ntBASIC19■□□□□ 0.63
HOXA11P31270 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19■□□□□ 0.63
HOXA11P31270 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19■□□□□ 0.63
HOXA11P31270 AC108751.1-201ENST00000490852 363 ntBASIC19■□□□□ 0.63
HOXA11P31270 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19■□□□□ 0.63
HOXA11P31270 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19■□□□□ 0.63
HOXA11P31270 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19■□□□□ 0.63
HOXA11P31270 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19■□□□□ 0.63
HOXA11P31270 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19■□□□□ 0.63
HOXA11P31270 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19■□□□□ 0.63
HOXA11P31270 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19■□□□□ 0.63
HOXA11P31270 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
HOXA11P31270 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19■□□□□ 0.63
HOXA11P31270 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXA11P31270 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19■□□□□ 0.63
HOXA11P31270 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXA11P31270 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXA11P31270 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19■□□□□ 0.63
HOXA11P31270 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HOXA11P31270 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXA11P31270 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXA11P31270 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19■□□□□ 0.63
HOXA11P31270 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19■□□□□ 0.63
HOXA11P31270 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19■□□□□ 0.63
HOXA11P31270 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19■□□□□ 0.63
HOXA11P31270 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19■□□□□ 0.63
HOXA11P31270 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19■□□□□ 0.63
HOXA11P31270 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HOXA11P31270 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19■□□□□ 0.63
HOXA11P31270 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19■□□□□ 0.63
HOXA11P31270 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.99■□□□□ 0.63
HOXA11P31270 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.99■□□□□ 0.63
HOXA11P31270 NEFHP1-201ENST00000412845 2629 ntBASIC18.99■□□□□ 0.63
HOXA11P31270 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
HOXA11P31270 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
HOXA11P31270 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.99■□□□□ 0.63
HOXA11P31270 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXA11P31270 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.99■□□□□ 0.63
HOXA11P31270 SLC25A6P5-201ENST00000435663 894 ntBASIC18.99■□□□□ 0.63
HOXA11P31270 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.99■□□□□ 0.63
HOXA11P31270 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HOXA11P31270 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HOXA11P31270 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXA11P31270 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXA11P31270 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXA11P31270 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXA11P31270 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
HOXA11P31270 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HOXA11P31270 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXA11P31270 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA11P31270 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
HOXA11P31270 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA11P31270 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA11P31270 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HOXA11P31270 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.98■□□□□ 0.63
HOXA11P31270 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.98■□□□□ 0.63
HOXA11P31270 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.98■□□□□ 0.63
HOXA11P31270 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA11P31270 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA11P31270 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.98■□□□□ 0.63
HOXA11P31270 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
HOXA11P31270 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.98■□□□□ 0.63
HOXA11P31270 AC007967.2-201ENST00000432613 625 ntBASIC18.98■□□□□ 0.63
HOXA11P31270 RPS15P9-201ENST00000494093 319 ntBASIC18.98■□□□□ 0.63
HOXA11P31270 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.98■□□□□ 0.63
HOXA11P31270 IGHV3-65-201ENST00000523210 341 ntBASIC18.98■□□□□ 0.63
HOXA11P31270 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.98■□□□□ 0.63
HOXA11P31270 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.98■□□□□ 0.63
HOXA11P31270 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.98■□□□□ 0.63
HOXA11P31270 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.98■□□□□ 0.63
HOXA11P31270 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.98■□□□□ 0.63
HOXA11P31270 AC008667.4-201ENST00000607370 168 ntBASIC18.98■□□□□ 0.63
HOXA11P31270 LINC01451-201ENST00000623792 534 ntBASIC18.98■□□□□ 0.63
HOXA11P31270 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
HOXA11P31270 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA11P31270 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.98■□□□□ 0.63
HOXA11P31270 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.98■□□□□ 0.63
HOXA11P31270 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.98■□□□□ 0.63
HOXA11P31270 LINC00304-203ENST00000565008 1864 ntBASIC18.98■□□□□ 0.63
HOXA11P31270 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA11P31270 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA11P31270 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.98■□□□□ 0.63
HOXA11P31270 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.98■□□□□ 0.63
HOXA11P31270 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
HOXA11P31270 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA11P31270 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.98■□□□□ 0.63
HOXA11P31270 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.98■□□□□ 0.63
HOXA11P31270 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA11P31270 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA11P31270 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
HOXA11P31270 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA11P31270 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
HOXA11P31270 GPR89P-201ENST00000407924 1495 ntBASIC18.97■□□□□ 0.63
HOXA11P31270 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.97■□□□□ 0.63
HOXA11P31270 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA11P31270 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HOXA11P31270 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.97■□□□□ 0.63
HOXA11P31270 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms