Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.45■□□□□ 0.22
NR4A1P22736 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR4A1P22736 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NR4A1P22736 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.45■□□□□ 0.22
NR4A1P22736 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NR4A1P22736 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NR4A1P22736 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NR4A1P22736 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NR4A1P22736 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR4A1P22736 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR4A1P22736 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR4A1P22736 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.45■□□□□ 0.22
NR4A1P22736 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.45■□□□□ 0.22
NR4A1P22736 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR4A1P22736 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR4A1P22736 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
NR4A1P22736 SLC25A1P2-201ENST00000430693 912 ntBASIC16.45■□□□□ 0.22
NR4A1P22736 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.45■□□□□ 0.22
NR4A1P22736 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR4A1P22736 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.45■□□□□ 0.22
NR4A1P22736 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NR4A1P22736 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.45■□□□□ 0.22
NR4A1P22736 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NR4A1P22736 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.45■□□□□ 0.22
NR4A1P22736 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.45■□□□□ 0.22
NR4A1P22736 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.45■□□□□ 0.22
NR4A1P22736 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NR4A1P22736 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.45■□□□□ 0.22
NR4A1P22736 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
NR4A1P22736 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NR4A1P22736 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR4A1P22736 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.45■□□□□ 0.22
NR4A1P22736 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
NR4A1P22736 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.45■□□□□ 0.22
NR4A1P22736 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.45■□□□□ 0.22
NR4A1P22736 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.45■□□□□ 0.22
NR4A1P22736 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR4A1P22736 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR4A1P22736 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR4A1P22736 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR4A1P22736 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR4A1P22736 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NR4A1P22736 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NR4A1P22736 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.45■□□□□ 0.22
NR4A1P22736 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.45■□□□□ 0.22
NR4A1P22736 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.45■□□□□ 0.22
NR4A1P22736 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR4A1P22736 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR4A1P22736 KRT18P22-201ENST00000402024 1347 ntBASIC16.45■□□□□ 0.22
NR4A1P22736 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.44■□□□□ 0.22
NR4A1P22736 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.44■□□□□ 0.22
NR4A1P22736 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NR4A1P22736 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NR4A1P22736 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NR4A1P22736 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NR4A1P22736 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NR4A1P22736 AC099343.3-201ENST00000605834 2503 ntBASIC16.44■□□□□ 0.22
NR4A1P22736 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.44■□□□□ 0.22
NR4A1P22736 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NR4A1P22736 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NR4A1P22736 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NR4A1P22736 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NR4A1P22736 AGGF1P2-201ENST00000426656 2106 ntBASIC16.44■□□□□ 0.22
NR4A1P22736 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.44■□□□□ 0.22
NR4A1P22736 CA15P1-201ENST00000481698 905 ntBASIC16.44■□□□□ 0.22
NR4A1P22736 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.44■□□□□ 0.22
NR4A1P22736 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.44■□□□□ 0.22
NR4A1P22736 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.44■□□□□ 0.22
NR4A1P22736 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NR4A1P22736 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NR4A1P22736 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.44■□□□□ 0.22
NR4A1P22736 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.44■□□□□ 0.22
NR4A1P22736 AL355312.1-201ENST00000407115 2176 ntBASIC16.44■□□□□ 0.22
NR4A1P22736 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NR4A1P22736 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.44■□□□□ 0.22
NR4A1P22736 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NR4A1P22736 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NR4A1P22736 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.44■□□□□ 0.22
NR4A1P22736 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NR4A1P22736 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.43■□□□□ 0.22
NR4A1P22736 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NR4A1P22736 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR4A1P22736 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR4A1P22736 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NR4A1P22736 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
NR4A1P22736 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NR4A1P22736 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
NR4A1P22736 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.43■□□□□ 0.22
NR4A1P22736 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR4A1P22736 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NR4A1P22736 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
NR4A1P22736 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR4A1P22736 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
NR4A1P22736 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR4A1P22736 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR4A1P22736 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR4A1P22736 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.43■□□□□ 0.22
NR4A1P22736 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.43■□□□□ 0.22
NR4A1P22736 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.43■□□□□ 0.22
NR4A1P22736 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms