Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMPD1P17405 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMPD1P17405 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMPD1P17405 KRT18P55-202ENST00000578578 1546 ntBASIC19.51■□□□□ 0.71
SMPD1P17405 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.51■□□□□ 0.71
SMPD1P17405 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMPD1P17405 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.51■□□□□ 0.71
SMPD1P17405 AC074386.1-202ENST00000463561 864 ntBASIC19.51■□□□□ 0.71
SMPD1P17405 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.51■□□□□ 0.71
SMPD1P17405 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.51■□□□□ 0.71
SMPD1P17405 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SMPD1P17405 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SMPD1P17405 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.51■□□□□ 0.71
SMPD1P17405 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.51■□□□□ 0.71
SMPD1P17405 BX323043.1-201ENST00000641006 1765 ntBASIC19.51■□□□□ 0.71
SMPD1P17405 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMPD1P17405 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SMPD1P17405 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.51■□□□□ 0.71
SMPD1P17405 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMPD1P17405 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.51■□□□□ 0.71
SMPD1P17405 AL138781.2-201ENST00000617896 1843 ntBASIC19.51■□□□□ 0.71
SMPD1P17405 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.51■□□□□ 0.71
SMPD1P17405 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SMPD1P17405 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMPD1P17405 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMPD1P17405 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SMPD1P17405 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMPD1P17405 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMPD1P17405 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SMPD1P17405 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.5■□□□□ 0.71
SMPD1P17405 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMPD1P17405 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMPD1P17405 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.5■□□□□ 0.71
SMPD1P17405 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SMPD1P17405 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SMPD1P17405 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMPD1P17405 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMPD1P17405 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMPD1P17405 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMPD1P17405 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SMPD1P17405 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.5■□□□□ 0.71
SMPD1P17405 ACTG1P4-201ENST00000425123 1122 ntBASIC19.5■□□□□ 0.71
SMPD1P17405 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.5■□□□□ 0.71
SMPD1P17405 CYMP-203ENST00000474680 1263 ntBASIC19.5■□□□□ 0.71
SMPD1P17405 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.5■□□□□ 0.71
SMPD1P17405 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.5■□□□□ 0.71
SMPD1P17405 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.5■□□□□ 0.71
SMPD1P17405 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.5■□□□□ 0.71
SMPD1P17405 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.5■□□□□ 0.71
SMPD1P17405 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SMPD1P17405 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.5■□□□□ 0.71
SMPD1P17405 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SMPD1P17405 TNXA-203ENST00000507684 2038 ntBASIC19.5■□□□□ 0.71
SMPD1P17405 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SMPD1P17405 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.5■□□□□ 0.71
SMPD1P17405 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMPD1P17405 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMPD1P17405 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMPD1P17405 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMPD1P17405 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMPD1P17405 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMPD1P17405 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMPD1P17405 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMPD1P17405 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.49■□□□□ 0.71
SMPD1P17405 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMPD1P17405 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.49■□□□□ 0.71
SMPD1P17405 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMPD1P17405 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMPD1P17405 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMPD1P17405 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SMPD1P17405 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMPD1P17405 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SMPD1P17405 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMPD1P17405 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMPD1P17405 FAM58CP-201ENST00000435741 640 ntBASIC19.49■□□□□ 0.71
SMPD1P17405 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.49■□□□□ 0.71
SMPD1P17405 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.49■□□□□ 0.71
SMPD1P17405 AC023141.13-201ENST00000604991 943 ntBASIC19.49■□□□□ 0.71
SMPD1P17405 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.49■□□□□ 0.71
SMPD1P17405 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.49■□□□□ 0.71
SMPD1P17405 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.49■□□□□ 0.71
SMPD1P17405 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMPD1P17405 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMPD1P17405 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMPD1P17405 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMPD1P17405 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMPD1P17405 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.48■□□□□ 0.71
SMPD1P17405 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMPD1P17405 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMPD1P17405 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMPD1P17405 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMPD1P17405 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMPD1P17405 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMPD1P17405 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMPD1P17405 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMPD1P17405 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMPD1P17405 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.48■□□□□ 0.71
SMPD1P17405 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.48■□□□□ 0.71
SMPD1P17405 AP002472.1-201ENST00000577490 586 ntBASIC19.48■□□□□ 0.71
SMPD1P17405 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms