Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CCDC130P13994 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC130P13994 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCDC130P13994 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC130P13994 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC130P13994 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC130P13994 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CCDC130P13994 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC130P13994 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC130P13994 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC130P13994 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC130P13994 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC130P13994 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC130P13994 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC130P13994 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CCDC130P13994 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC130P13994 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC130P13994 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CCDC130P13994 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC130P13994 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC130P13994 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC130P13994 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
CCDC130P13994 AC106795.1-205ENST00000512851 1056 ntBASIC18.68■□□□□ 0.58
CCDC130P13994 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC130P13994 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC130P13994 MTDHP3-201ENST00000594186 672 ntBASIC18.68■□□□□ 0.58
CCDC130P13994 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCDC130P13994 AD001527.2-201ENST00000622994 785 ntBASIC18.68■□□□□ 0.58
CCDC130P13994 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC130P13994 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC130P13994 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCDC130P13994 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC130P13994 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC130P13994 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC130P13994 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC130P13994 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC130P13994 AL355312.1-201ENST00000407115 2176 ntBASIC18.68■□□□□ 0.58
CCDC130P13994 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CCDC130P13994 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC130P13994 AC020916.1-201ENST00000587762 1774 ntBASIC18.68■□□□□ 0.58
CCDC130P13994 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC130P13994 AC005332.8-201ENST00000622750 2735 ntBASIC18.67■□□□□ 0.58
CCDC130P13994 AP005117.1-201ENST00000584346 1413 ntBASIC18.67■□□□□ 0.58
CCDC130P13994 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC130P13994 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC130P13994 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC130P13994 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC130P13994 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC130P13994 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CCDC130P13994 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC130P13994 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC130P13994 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC130P13994 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CCDC130P13994 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC130P13994 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC130P13994 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.67■□□□□ 0.58
CCDC130P13994 AC103564.2-201ENST00000432853 1299 ntBASIC18.67■□□□□ 0.58
CCDC130P13994 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC130P13994 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC130P13994 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
CCDC130P13994 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.67■□□□□ 0.58
CCDC130P13994 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC130P13994 AL355877.3-201ENST00000622820 899 ntBASIC18.67■□□□□ 0.58
CCDC130P13994 TP73-AS1-207ENST00000624167 988 ntBASIC18.67■□□□□ 0.58
CCDC130P13994 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC130P13994 AP000867.4-201ENST00000641616 219 ntBASIC18.67■□□□□ 0.58
CCDC130P13994 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC130P13994 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC130P13994 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC130P13994 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC130P13994 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC130P13994 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC130P13994 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC130P13994 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC130P13994 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC130P13994 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCDC130P13994 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC130P13994 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC130P13994 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC130P13994 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC130P13994 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC130P13994 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CCDC130P13994 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CCDC130P13994 BCL2-203ENST00000589955 5011 ntBASIC18.66■□□□□ 0.58
CCDC130P13994 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC130P13994 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
CCDC130P13994 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC130P13994 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC130P13994 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC130P13994 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC130P13994 FAAHP1-202ENST00000446499 1238 ntBASIC18.66■□□□□ 0.58
CCDC130P13994 FGFR3P6-201ENST00000457012 610 ntBASIC18.66■□□□□ 0.58
CCDC130P13994 AL121912.1-201ENST00000603683 238 ntBASIC18.66■□□□□ 0.58
CCDC130P13994 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC130P13994 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC130P13994 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC130P13994 HTR7P1-202ENST00000624664 4411 ntBASIC18.66■□□□□ 0.58
CCDC130P13994 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC130P13994 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC130P13994 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms