Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
THRAP10827 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
THRAP10827 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
THRAP10827 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
THRAP10827 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
THRAP10827 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
THRAP10827 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
THRAP10827 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
THRAP10827 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
THRAP10827 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
THRAP10827 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
THRAP10827 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
THRAP10827 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
THRAP10827 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.73■□□□□ 0.43
THRAP10827 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
THRAP10827 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.73■□□□□ 0.43
THRAP10827 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.73■□□□□ 0.43
THRAP10827 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.73■□□□□ 0.43
THRAP10827 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.73■□□□□ 0.43
THRAP10827 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
THRAP10827 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
THRAP10827 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.73■□□□□ 0.43
THRAP10827 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.73■□□□□ 0.43
THRAP10827 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.73■□□□□ 0.43
THRAP10827 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
THRAP10827 PP12613-201ENST00000424958 2230 ntBASIC17.73■□□□□ 0.43
THRAP10827 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
THRAP10827 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.73■□□□□ 0.43
THRAP10827 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.73■□□□□ 0.43
THRAP10827 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
THRAP10827 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.73■□□□□ 0.43
THRAP10827 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
THRAP10827 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.72■□□□□ 0.43
THRAP10827 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
THRAP10827 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
THRAP10827 AC084018.2-201ENST00000613093 2607 ntBASIC17.72■□□□□ 0.43
THRAP10827 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.72■□□□□ 0.43
THRAP10827 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
THRAP10827 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
THRAP10827 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.72■□□□□ 0.43
THRAP10827 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
THRAP10827 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.72■□□□□ 0.43
THRAP10827 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.72■□□□□ 0.43
THRAP10827 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
THRAP10827 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.72■□□□□ 0.43
THRAP10827 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
THRAP10827 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
THRAP10827 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
THRAP10827 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
THRAP10827 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
THRAP10827 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.72■□□□□ 0.43
THRAP10827 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
THRAP10827 AC009065.1-201ENST00000564055 1225 ntBASIC17.72■□□□□ 0.43
THRAP10827 RN7SL510P-201ENST00000581311 263 ntBASIC17.72■□□□□ 0.43
THRAP10827 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.72■□□□□ 0.43
THRAP10827 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
THRAP10827 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
THRAP10827 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.72■□□□□ 0.43
THRAP10827 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
THRAP10827 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.72■□□□□ 0.43
THRAP10827 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
THRAP10827 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.72■□□□□ 0.43
THRAP10827 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
THRAP10827 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
THRAP10827 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
THRAP10827 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
THRAP10827 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
THRAP10827 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.71■□□□□ 0.43
THRAP10827 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
THRAP10827 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
THRAP10827 PHGDH-209ENST00000641074 1780 ntBASIC17.71■□□□□ 0.43
THRAP10827 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
THRAP10827 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
THRAP10827 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
THRAP10827 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
THRAP10827 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
THRAP10827 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
THRAP10827 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.71■□□□□ 0.43
THRAP10827 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
THRAP10827 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
THRAP10827 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.71■□□□□ 0.43
THRAP10827 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
THRAP10827 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
THRAP10827 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
THRAP10827 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.71■□□□□ 0.43
THRAP10827 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
THRAP10827 LINC00265-3P-201ENST00000447588 903 ntBASIC17.71■□□□□ 0.43
THRAP10827 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.71■□□□□ 0.43
THRAP10827 AC090616.6-201ENST00000582640 721 ntBASIC17.71■□□□□ 0.43
THRAP10827 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.71■□□□□ 0.43
THRAP10827 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
THRAP10827 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.71■□□□□ 0.43
THRAP10827 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
THRAP10827 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
THRAP10827 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
THRAP10827 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
THRAP10827 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
THRAP10827 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
THRAP10827 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
THRAP10827 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms