Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRPRAP08240 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRPRAP08240 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SRPRAP08240 AC009336.1-201ENST00000608941 1553 ntBASIC17.79■□□□□ 0.44
SRPRAP08240 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRPRAP08240 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.78■□□□□ 0.44
SRPRAP08240 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.78■□□□□ 0.44
SRPRAP08240 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRPRAP08240 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRPRAP08240 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.78■□□□□ 0.44
SRPRAP08240 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRPRAP08240 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRPRAP08240 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRPRAP08240 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRPRAP08240 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRPRAP08240 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SRPRAP08240 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SRPRAP08240 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.78■□□□□ 0.44
SRPRAP08240 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.78■□□□□ 0.44
SRPRAP08240 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.78■□□□□ 0.44
SRPRAP08240 KRT18P58-201ENST00000527480 1120 ntBASIC17.78■□□□□ 0.44
SRPRAP08240 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.78■□□□□ 0.44
SRPRAP08240 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.78■□□□□ 0.44
SRPRAP08240 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.78■□□□□ 0.44
SRPRAP08240 MIR1199-201ENST00000621445 119 ntBASIC17.78■□□□□ 0.44
SRPRAP08240 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRPRAP08240 AC020763.4-201ENST00000623414 4170 ntBASIC17.78■□□□□ 0.44
SRPRAP08240 NCF1C-201ENST00000438382 1427 ntBASIC17.78■□□□□ 0.44
SRPRAP08240 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRPRAP08240 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.78■□□□□ 0.44
SRPRAP08240 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRPRAP08240 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.78■□□□□ 0.44
SRPRAP08240 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRPRAP08240 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRPRAP08240 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRPRAP08240 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRPRAP08240 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SRPRAP08240 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRPRAP08240 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.77■□□□□ 0.44
SRPRAP08240 AL390961.4-201ENST00000623958 2535 ntBASIC17.77■□□□□ 0.44
SRPRAP08240 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRPRAP08240 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SRPRAP08240 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRPRAP08240 AP002414.3-201ENST00000589352 1468 ntBASIC17.77■□□□□ 0.44
SRPRAP08240 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRPRAP08240 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.77■□□□□ 0.44
SRPRAP08240 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRPRAP08240 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SRPRAP08240 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.77■□□□□ 0.44
SRPRAP08240 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRPRAP08240 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRPRAP08240 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SRPRAP08240 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.77■□□□□ 0.44
SRPRAP08240 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.77■□□□□ 0.44
SRPRAP08240 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.77■□□□□ 0.44
SRPRAP08240 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.77■□□□□ 0.44
SRPRAP08240 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.77■□□□□ 0.44
SRPRAP08240 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.77■□□□□ 0.44
SRPRAP08240 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.77■□□□□ 0.44
SRPRAP08240 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.77■□□□□ 0.44
SRPRAP08240 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.77■□□□□ 0.44
SRPRAP08240 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.77■□□□□ 0.44
SRPRAP08240 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SRPRAP08240 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.77■□□□□ 0.44
SRPRAP08240 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.77■□□□□ 0.44
SRPRAP08240 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.77■□□□□ 0.44
SRPRAP08240 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
SRPRAP08240 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.77■□□□□ 0.43
SRPRAP08240 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRPRAP08240 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SRPRAP08240 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.77■□□□□ 0.43
SRPRAP08240 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.77■□□□□ 0.43
SRPRAP08240 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRPRAP08240 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRPRAP08240 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SRPRAP08240 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRPRAP08240 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SRPRAP08240 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SRPRAP08240 AL354751.1-201ENST00000412768 1863 ntBASIC17.76■□□□□ 0.43
SRPRAP08240 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SRPRAP08240 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRPRAP08240 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.76■□□□□ 0.43
SRPRAP08240 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SRPRAP08240 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SRPRAP08240 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRPRAP08240 AC073621.1-201ENST00000392730 636 ntBASIC17.76■□□□□ 0.43
SRPRAP08240 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.76■□□□□ 0.43
SRPRAP08240 SLC25A6P5-201ENST00000435663 894 ntBASIC17.76■□□□□ 0.43
SRPRAP08240 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SRPRAP08240 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRPRAP08240 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRPRAP08240 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SRPRAP08240 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.76■□□□□ 0.43
SRPRAP08240 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.76■□□□□ 0.43
SRPRAP08240 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.76■□□□□ 0.43
SRPRAP08240 AL356488.2-201ENST00000602755 427 ntBASIC17.76■□□□□ 0.43
SRPRAP08240 AC004706.3-202ENST00000621574 984 ntBASIC17.76■□□□□ 0.43
SRPRAP08240 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SRPRAP08240 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SRPRAP08240 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms