Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN1P07384 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN1P07384 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN1P07384 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.4■□□□□ 0.38
CAPN1P07384 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN1P07384 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.4■□□□□ 0.38
CAPN1P07384 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.4■□□□□ 0.38
CAPN1P07384 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.4■□□□□ 0.38
CAPN1P07384 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.4■□□□□ 0.38
CAPN1P07384 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CAPN1P07384 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN1P07384 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.4■□□□□ 0.38
CAPN1P07384 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN1P07384 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CAPN1P07384 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN1P07384 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CAPN1P07384 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN1P07384 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN1P07384 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN1P07384 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CAPN1P07384 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN1P07384 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN1P07384 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CAPN1P07384 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN1P07384 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CAPN1P07384 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.39■□□□□ 0.38
CAPN1P07384 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CAPN1P07384 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CAPN1P07384 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
CAPN1P07384 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CAPN1P07384 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.39■□□□□ 0.37
CAPN1P07384 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.39■□□□□ 0.37
CAPN1P07384 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CAPN1P07384 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
CAPN1P07384 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN1P07384 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN1P07384 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN1P07384 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN1P07384 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.39■□□□□ 0.37
CAPN1P07384 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN1P07384 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN1P07384 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.39■□□□□ 0.37
CAPN1P07384 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.39■□□□□ 0.37
CAPN1P07384 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.39■□□□□ 0.37
CAPN1P07384 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.39■□□□□ 0.37
CAPN1P07384 MIR3652-201ENST00000579335 131 ntBASIC17.39■□□□□ 0.37
CAPN1P07384 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CAPN1P07384 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN1P07384 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN1P07384 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN1P07384 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN1P07384 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN1P07384 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN1P07384 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN1P07384 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CAPN1P07384 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CAPN1P07384 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.39■□□□□ 0.37
CAPN1P07384 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.39■□□□□ 0.37
CAPN1P07384 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CAPN1P07384 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.39■□□□□ 0.37
CAPN1P07384 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CAPN1P07384 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN1P07384 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.38■□□□□ 0.37
CAPN1P07384 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN1P07384 AC141586.5-201ENST00000624546 2050 ntBASIC17.38■□□□□ 0.37
CAPN1P07384 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CAPN1P07384 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN1P07384 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN1P07384 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN1P07384 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN1P07384 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.38■□□□□ 0.37
CAPN1P07384 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.38■□□□□ 0.37
CAPN1P07384 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.38■□□□□ 0.37
CAPN1P07384 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN1P07384 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.38■□□□□ 0.37
CAPN1P07384 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN1P07384 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN1P07384 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.38■□□□□ 0.37
CAPN1P07384 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN1P07384 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.38■□□□□ 0.37
CAPN1P07384 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.38■□□□□ 0.37
CAPN1P07384 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.38■□□□□ 0.37
CAPN1P07384 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN1P07384 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.38■□□□□ 0.37
CAPN1P07384 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN1P07384 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN1P07384 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN1P07384 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
CAPN1P07384 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.37■□□□□ 0.37
CAPN1P07384 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.37■□□□□ 0.37
CAPN1P07384 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN1P07384 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN1P07384 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN1P07384 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.37■□□□□ 0.37
CAPN1P07384 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN1P07384 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.37■□□□□ 0.37
CAPN1P07384 Z83836.1-201ENST00000624605 1642 ntBASIC17.37■□□□□ 0.37
CAPN1P07384 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN1P07384 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN1P07384 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms