Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTSDP07339 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.67□□□□□ -0.06
CTSDP07339 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTSDP07339 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CTSDP07339 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CTSDP07339 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.67□□□□□ -0.06
CTSDP07339 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.67□□□□□ -0.06
CTSDP07339 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.67□□□□□ -0.06
CTSDP07339 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.67□□□□□ -0.06
CTSDP07339 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.67□□□□□ -0.06
CTSDP07339 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CTSDP07339 FLJ38576-201ENST00000623820 2459 ntBASIC14.67□□□□□ -0.06
CTSDP07339 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTSDP07339 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTSDP07339 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTSDP07339 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.67□□□□□ -0.06
CTSDP07339 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTSDP07339 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CTSDP07339 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CTSDP07339 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CTSDP07339 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTSDP07339 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CTSDP07339 GCSHP5-201ENST00000443090 522 ntBASIC14.67□□□□□ -0.06
CTSDP07339 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.67□□□□□ -0.06
CTSDP07339 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.67□□□□□ -0.06
CTSDP07339 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CTSDP07339 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.67□□□□□ -0.06
CTSDP07339 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.67□□□□□ -0.06
CTSDP07339 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.67□□□□□ -0.06
CTSDP07339 AP005242.2-201ENST00000580065 1175 ntBASIC14.67□□□□□ -0.06
CTSDP07339 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.67□□□□□ -0.06
CTSDP07339 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.67□□□□□ -0.06
CTSDP07339 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTSDP07339 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.67□□□□□ -0.06
CTSDP07339 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CTSDP07339 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTSDP07339 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTSDP07339 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.67□□□□□ -0.06
CTSDP07339 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CTSDP07339 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.67□□□□□ -0.06
CTSDP07339 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTSDP07339 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTSDP07339 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSDP07339 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CTSDP07339 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.66□□□□□ -0.06
CTSDP07339 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSDP07339 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.66□□□□□ -0.06
CTSDP07339 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSDP07339 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSDP07339 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.66□□□□□ -0.06
CTSDP07339 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSDP07339 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.66□□□□□ -0.06
CTSDP07339 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CTSDP07339 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CTSDP07339 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSDP07339 AL603756.1-201ENST00000606511 2163 ntBASIC14.66□□□□□ -0.06
CTSDP07339 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSDP07339 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.66□□□□□ -0.06
CTSDP07339 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CTSDP07339 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSDP07339 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CTSDP07339 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.66□□□□□ -0.06
CTSDP07339 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.66□□□□□ -0.06
CTSDP07339 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.66□□□□□ -0.06
CTSDP07339 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.66□□□□□ -0.06
CTSDP07339 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.66□□□□□ -0.06
CTSDP07339 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.66□□□□□ -0.06
CTSDP07339 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.66□□□□□ -0.06
CTSDP07339 AL139384.1-201ENST00000612143 3047 ntBASIC14.66□□□□□ -0.06
CTSDP07339 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CTSDP07339 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CTSDP07339 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.66□□□□□ -0.06
CTSDP07339 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSDP07339 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSDP07339 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CTSDP07339 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CTSDP07339 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSDP07339 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSDP07339 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CTSDP07339 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSDP07339 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTSDP07339 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTSDP07339 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTSDP07339 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CTSDP07339 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CTSDP07339 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CTSDP07339 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTSDP07339 AC005915.1-201ENST00000624912 2018 ntBASIC14.65□□□□□ -0.06
CTSDP07339 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTSDP07339 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTSDP07339 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTSDP07339 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTSDP07339 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CTSDP07339 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CTSDP07339 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.65□□□□□ -0.06
CTSDP07339 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.65□□□□□ -0.06
CTSDP07339 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTSDP07339 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.65□□□□□ -0.06
CTSDP07339 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.65□□□□□ -0.06
CTSDP07339 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms