Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
APPP05067 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
APPP05067 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
APPP05067 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
APPP05067 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.18■□□□□ 0.98
APPP05067 EMBP1-201ENST00000458200 901 ntBASIC21.18■□□□□ 0.98
APPP05067 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.18■□□□□ 0.98
APPP05067 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.18■□□□□ 0.98
APPP05067 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC21.18■□□□□ 0.98
APPP05067 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
APPP05067 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
APPP05067 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.18■□□□□ 0.98
APPP05067 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
APPP05067 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
APPP05067 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.18■□□□□ 0.98
APPP05067 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
APPP05067 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC21.18■□□□□ 0.98
APPP05067 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
APPP05067 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
APPP05067 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
APPP05067 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.18■□□□□ 0.98
APPP05067 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
APPP05067 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.17■□□□□ 0.98
APPP05067 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
APPP05067 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
APPP05067 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC21.17■□□□□ 0.98
APPP05067 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
APPP05067 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
APPP05067 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
APPP05067 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
APPP05067 COX5BP2-201ENST00000392354 334 ntBASIC21.17■□□□□ 0.98
APPP05067 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.17■□□□□ 0.98
APPP05067 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.17■□□□□ 0.98
APPP05067 DDX43P3-201ENST00000441064 443 ntBASIC21.17■□□□□ 0.98
APPP05067 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.17■□□□□ 0.98
APPP05067 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.17■□□□□ 0.98
APPP05067 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC21.17■□□□□ 0.98
APPP05067 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
APPP05067 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
APPP05067 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
APPP05067 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.17■□□□□ 0.98
APPP05067 AL121894.2-201ENST00000602977 491 ntBASIC21.17■□□□□ 0.98
APPP05067 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
APPP05067 SIRPAP1-201ENST00000448467 1770 ntBASIC21.17■□□□□ 0.98
APPP05067 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC21.17■□□□□ 0.98
APPP05067 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.17■□□□□ 0.98
APPP05067 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
APPP05067 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.17■□□□□ 0.98
APPP05067 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APPP05067 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
APPP05067 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APPP05067 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
APPP05067 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APPP05067 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
APPP05067 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
APPP05067 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
APPP05067 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
APPP05067 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.16■□□□□ 0.98
APPP05067 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
APPP05067 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
APPP05067 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
APPP05067 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
APPP05067 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
APPP05067 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
APPP05067 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
APPP05067 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
APPP05067 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
APPP05067 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21.16■□□□□ 0.98
APPP05067 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.16■□□□□ 0.98
APPP05067 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
APPP05067 TPM4P1-201ENST00000436100 807 ntBASIC21.16■□□□□ 0.98
APPP05067 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.16■□□□□ 0.98
APPP05067 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.16■□□□□ 0.98
APPP05067 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.16■□□□□ 0.98
APPP05067 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.16■□□□□ 0.98
APPP05067 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.16■□□□□ 0.98
APPP05067 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21.16■□□□□ 0.98
APPP05067 GZMM-202ENST00000592501 941 ntTSL 3 BASIC21.16■□□□□ 0.98
APPP05067 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
APPP05067 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
APPP05067 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
APPP05067 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.16■□□□□ 0.98
APPP05067 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
APPP05067 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.16■□□□□ 0.98
APPP05067 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
APPP05067 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
APPP05067 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APPP05067 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APPP05067 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
APPP05067 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
APPP05067 BX276092.7-203ENST00000637198 1536 ntBASIC21.15■□□□□ 0.98
APPP05067 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APPP05067 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
APPP05067 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APPP05067 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.15■□□□□ 0.98
APPP05067 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
APPP05067 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
APPP05067 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.15■□□□□ 0.98
APPP05067 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APPP05067 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms