Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CD74P04233 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CD74P04233 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD74P04233 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD74P04233 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD74P04233 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.85□□□□□ -0.03
CD74P04233 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD74P04233 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD74P04233 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD74P04233 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CD74P04233 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD74P04233 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD74P04233 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD74P04233 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.85□□□□□ -0.03
CD74P04233 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
CD74P04233 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.85□□□□□ -0.03
CD74P04233 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD74P04233 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.85□□□□□ -0.03
CD74P04233 HLA-L-209ENST00000420110 1011 ntBASIC14.85□□□□□ -0.03
CD74P04233 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD74P04233 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.85□□□□□ -0.03
CD74P04233 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.85□□□□□ -0.03
CD74P04233 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.85□□□□□ -0.03
CD74P04233 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD74P04233 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD74P04233 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.85□□□□□ -0.03
CD74P04233 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.85□□□□□ -0.03
CD74P04233 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD74P04233 PCDHB17P-201ENST00000539533 2393 ntBASIC14.85□□□□□ -0.03
CD74P04233 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD74P04233 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD74P04233 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD74P04233 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CD74P04233 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.85□□□□□ -0.03
CD74P04233 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD74P04233 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD74P04233 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
CD74P04233 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD74P04233 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD74P04233 KRT8P47-201ENST00000604727 1398 ntBASIC14.85□□□□□ -0.03
CD74P04233 CYP2T1P-202ENST00000641596 2535 ntBASIC14.85□□□□□ -0.03
CD74P04233 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD74P04233 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD74P04233 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD74P04233 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD74P04233 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD74P04233 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CD74P04233 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD74P04233 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CD74P04233 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.84□□□□□ -0.03
CD74P04233 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.84□□□□□ -0.03
CD74P04233 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD74P04233 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
CD74P04233 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.84□□□□□ -0.03
CD74P04233 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.84□□□□□ -0.03
CD74P04233 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.84□□□□□ -0.03
CD74P04233 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.84□□□□□ -0.03
CD74P04233 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CD74P04233 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.84□□□□□ -0.03
CD74P04233 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.84□□□□□ -0.03
CD74P04233 AL023803.3-201ENST00000615559 522 ntBASIC14.84□□□□□ -0.03
CD74P04233 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CD74P04233 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD74P04233 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD74P04233 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD74P04233 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.84□□□□□ -0.03
CD74P04233 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.84□□□□□ -0.03
CD74P04233 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD74P04233 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD74P04233 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.84□□□□□ -0.03
CD74P04233 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD74P04233 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CD74P04233 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD74P04233 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CD74P04233 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD74P04233 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD74P04233 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD74P04233 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD74P04233 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD74P04233 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD74P04233 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CD74P04233 AC078925.2-201ENST00000624013 1973 ntBASIC14.84□□□□□ -0.03
CD74P04233 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CD74P04233 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.83□□□□□ -0.03
CD74P04233 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CD74P04233 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CD74P04233 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CD74P04233 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD74P04233 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD74P04233 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.83□□□□□ -0.04
CD74P04233 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD74P04233 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD74P04233 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD74P04233 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
CD74P04233 FAM197Y1-201ENST00000421178 764 ntBASIC14.83□□□□□ -0.04
CD74P04233 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.83□□□□□ -0.04
CD74P04233 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.83□□□□□ -0.04
CD74P04233 AP003041.3-201ENST00000527151 707 ntBASIC14.83□□□□□ -0.04
CD74P04233 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.83□□□□□ -0.04
CD74P04233 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms