Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND1P03886 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.68■□□□□ 0.26
MT-ND1P03886 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND1P03886 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND1P03886 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.68■□□□□ 0.26
MT-ND1P03886 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.68■□□□□ 0.26
MT-ND1P03886 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
MT-ND1P03886 WWOX-216ENST00000569818 525 ntBASIC16.68■□□□□ 0.26
MT-ND1P03886 AP000525.1-201ENST00000608286 694 ntBASIC16.68■□□□□ 0.26
MT-ND1P03886 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.68■□□□□ 0.26
MT-ND1P03886 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND1P03886 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND1P03886 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND1P03886 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
MT-ND1P03886 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND1P03886 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
MT-ND1P03886 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND1P03886 AC092338.2-201ENST00000568827 1415 ntBASIC16.68■□□□□ 0.26
MT-ND1P03886 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND1P03886 LINC02199-201ENST00000506655 2702 ntBASIC16.68■□□□□ 0.26
MT-ND1P03886 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.67■□□□□ 0.26
MT-ND1P03886 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND1P03886 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND1P03886 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
MT-ND1P03886 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.67■□□□□ 0.26
MT-ND1P03886 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
MT-ND1P03886 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND1P03886 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND1P03886 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND1P03886 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND1P03886 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
MT-ND1P03886 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
MT-ND1P03886 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.67■□□□□ 0.26
MT-ND1P03886 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
MT-ND1P03886 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.67■□□□□ 0.26
MT-ND1P03886 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND1P03886 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.67■□□□□ 0.26
MT-ND1P03886 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.67■□□□□ 0.26
MT-ND1P03886 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
MT-ND1P03886 BX088651.1-201ENST00000540551 451 ntBASIC16.67■□□□□ 0.26
MT-ND1P03886 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.67■□□□□ 0.26
MT-ND1P03886 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.67■□□□□ 0.26
MT-ND1P03886 CR769767.2-201ENST00000622735 460 ntBASIC16.67■□□□□ 0.26
MT-ND1P03886 TMEM191A-211ENST00000637163 1067 ntBASIC16.67■□□□□ 0.26
MT-ND1P03886 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND1P03886 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND1P03886 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
MT-ND1P03886 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND1P03886 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND1P03886 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND1P03886 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND1P03886 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
MT-ND1P03886 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND1P03886 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND1P03886 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
MT-ND1P03886 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.66■□□□□ 0.26
MT-ND1P03886 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.66■□□□□ 0.26
MT-ND1P03886 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.66■□□□□ 0.26
MT-ND1P03886 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
MT-ND1P03886 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.66■□□□□ 0.26
MT-ND1P03886 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND1P03886 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND1P03886 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND1P03886 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND1P03886 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND1P03886 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
MT-ND1P03886 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.66■□□□□ 0.26
MT-ND1P03886 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
MT-ND1P03886 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND1P03886 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND1P03886 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
MT-ND1P03886 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.66■□□□□ 0.26
MT-ND1P03886 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.66■□□□□ 0.26
MT-ND1P03886 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.66■□□□□ 0.26
MT-ND1P03886 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.66■□□□□ 0.26
MT-ND1P03886 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
MT-ND1P03886 AP006294.2-201ENST00000641667 209 ntBASIC16.66■□□□□ 0.26
MT-ND1P03886 AC116562.4-202ENST00000641738 218 ntBASIC16.66■□□□□ 0.26
MT-ND1P03886 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND1P03886 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND1P03886 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND1P03886 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND1P03886 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND1P03886 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND1P03886 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.66■□□□□ 0.26
MT-ND1P03886 KRT17P2-201ENST00000300992 1314 ntBASIC16.66■□□□□ 0.26
MT-ND1P03886 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND1P03886 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-ND1P03886 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND1P03886 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND1P03886 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.65■□□□□ 0.26
MT-ND1P03886 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND1P03886 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MT-ND1P03886 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND1P03886 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MT-ND1P03886 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND1P03886 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND1P03886 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-ND1P03886 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.65■□□□□ 0.26
MT-ND1P03886 AL390955.1-201ENST00000428694 934 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms