Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LMNAP02545 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LMNAP02545 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.46■□□□□ 0.55
LMNAP02545 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LMNAP02545 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
LMNAP02545 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
LMNAP02545 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
LMNAP02545 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMNAP02545 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMNAP02545 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMNAP02545 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMNAP02545 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMNAP02545 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LMNAP02545 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMNAP02545 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
LMNAP02545 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMNAP02545 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.45■□□□□ 0.54
LMNAP02545 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.45■□□□□ 0.54
LMNAP02545 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LMNAP02545 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LMNAP02545 IRX1P1-201ENST00000438849 1838 ntBASIC18.45■□□□□ 0.54
LMNAP02545 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMNAP02545 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LMNAP02545 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
LMNAP02545 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMNAP02545 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.45■□□□□ 0.54
LMNAP02545 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.45■□□□□ 0.54
LMNAP02545 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.45■□□□□ 0.54
LMNAP02545 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.45■□□□□ 0.54
LMNAP02545 AC040169.1-201ENST00000565382 521 ntBASIC18.45■□□□□ 0.54
LMNAP02545 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.45■□□□□ 0.54
LMNAP02545 KRT8P7-201ENST00000533003 1432 ntBASIC18.45■□□□□ 0.54
LMNAP02545 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMNAP02545 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMNAP02545 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMNAP02545 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMNAP02545 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMNAP02545 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMNAP02545 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LMNAP02545 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LMNAP02545 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LMNAP02545 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.45■□□□□ 0.54
LMNAP02545 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LMNAP02545 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LMNAP02545 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LMNAP02545 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LMNAP02545 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LMNAP02545 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LMNAP02545 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.44■□□□□ 0.54
LMNAP02545 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LMNAP02545 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
LMNAP02545 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LMNAP02545 HNRNPDP1-201ENST00000439535 754 ntBASIC18.44■□□□□ 0.54
LMNAP02545 KRT18P3-201ENST00000451602 1288 ntBASIC18.44■□□□□ 0.54
LMNAP02545 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
LMNAP02545 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.44■□□□□ 0.54
LMNAP02545 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.44■□□□□ 0.54
LMNAP02545 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
LMNAP02545 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LMNAP02545 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LMNAP02545 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LMNAP02545 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.44■□□□□ 0.54
LMNAP02545 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.44■□□□□ 0.54
LMNAP02545 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
LMNAP02545 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
LMNAP02545 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LMNAP02545 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LMNAP02545 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.44■□□□□ 0.54
LMNAP02545 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
LMNAP02545 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LMNAP02545 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LMNAP02545 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LMNAP02545 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.44■□□□□ 0.54
LMNAP02545 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LMNAP02545 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LMNAP02545 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.43■□□□□ 0.54
LMNAP02545 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
LMNAP02545 ANO7L1-203ENST00000602586 1720 ntBASIC18.43■□□□□ 0.54
LMNAP02545 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LMNAP02545 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LMNAP02545 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LMNAP02545 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.43■□□□□ 0.54
LMNAP02545 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LMNAP02545 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.43■□□□□ 0.54
LMNAP02545 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LMNAP02545 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.43■□□□□ 0.54
LMNAP02545 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LMNAP02545 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
LMNAP02545 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.43■□□□□ 0.54
LMNAP02545 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
LMNAP02545 TNRC18P3-201ENST00000441896 2691 ntBASIC18.43■□□□□ 0.54
LMNAP02545 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LMNAP02545 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
LMNAP02545 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LMNAP02545 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LMNAP02545 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.43■□□□□ 0.54
LMNAP02545 DNAJB3-202ENST00000449667 1266 ntBASIC18.43■□□□□ 0.54
LMNAP02545 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
LMNAP02545 IGHV3-22-201ENST00000520721 359 ntBASIC18.43■□□□□ 0.54
LMNAP02545 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms