Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.99■□□□□ 0.79
ALDH1A1P00352 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
ALDH1A1P00352 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ALDH1A1P00352 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ALDH1A1P00352 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ALDH1A1P00352 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ALDH1A1P00352 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
ALDH1A1P00352 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
ALDH1A1P00352 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
ALDH1A1P00352 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ALDH1A1P00352 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ALDH1A1P00352 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.98■□□□□ 0.79
ALDH1A1P00352 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
ALDH1A1P00352 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.98■□□□□ 0.79
ALDH1A1P00352 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ALDH1A1P00352 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.98■□□□□ 0.79
ALDH1A1P00352 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
ALDH1A1P00352 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.98■□□□□ 0.79
ALDH1A1P00352 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ALDH1A1P00352 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ALDH1A1P00352 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ALDH1A1P00352 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.98■□□□□ 0.79
ALDH1A1P00352 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC19.98■□□□□ 0.79
ALDH1A1P00352 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.98■□□□□ 0.79
ALDH1A1P00352 TREML5P-201ENST00000421694 576 ntBASIC19.98■□□□□ 0.79
ALDH1A1P00352 GPS2P2-201ENST00000430745 888 ntBASIC19.98■□□□□ 0.79
ALDH1A1P00352 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.98■□□□□ 0.79
ALDH1A1P00352 MEIS3P1-201ENST00000495167 958 ntBASIC19.98■□□□□ 0.79
ALDH1A1P00352 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ALDH1A1P00352 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.98■□□□□ 0.79
ALDH1A1P00352 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.98■□□□□ 0.79
ALDH1A1P00352 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.98■□□□□ 0.79
ALDH1A1P00352 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.98■□□□□ 0.79
ALDH1A1P00352 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
ALDH1A1P00352 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.98■□□□□ 0.79
ALDH1A1P00352 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ALDH1A1P00352 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ALDH1A1P00352 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ALDH1A1P00352 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.98■□□□□ 0.79
ALDH1A1P00352 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ALDH1A1P00352 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ALDH1A1P00352 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ALDH1A1P00352 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ALDH1A1P00352 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
ALDH1A1P00352 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
ALDH1A1P00352 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.97■□□□□ 0.79
ALDH1A1P00352 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ALDH1A1P00352 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ALDH1A1P00352 AC002558.1-201ENST00000488906 803 ntBASIC19.97■□□□□ 0.79
ALDH1A1P00352 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.97■□□□□ 0.79
ALDH1A1P00352 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.97■□□□□ 0.79
ALDH1A1P00352 RARRES2P8-201ENST00000566335 367 ntBASIC19.97■□□□□ 0.79
ALDH1A1P00352 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ALDH1A1P00352 PHGDH-209ENST00000641074 1780 ntBASIC19.97■□□□□ 0.79
ALDH1A1P00352 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
ALDH1A1P00352 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.97■□□□□ 0.79
ALDH1A1P00352 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ALDH1A1P00352 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.97■□□□□ 0.79
ALDH1A1P00352 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ALDH1A1P00352 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
ALDH1A1P00352 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.97■□□□□ 0.79
ALDH1A1P00352 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ALDH1A1P00352 PCDHAC2-203ENST00000615316 3011 ntBASIC19.97■□□□□ 0.79
ALDH1A1P00352 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ALDH1A1P00352 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.96■□□□□ 0.79
ALDH1A1P00352 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ALDH1A1P00352 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ALDH1A1P00352 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.96■□□□□ 0.79
ALDH1A1P00352 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.96■□□□□ 0.79
ALDH1A1P00352 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ALDH1A1P00352 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ALDH1A1P00352 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ALDH1A1P00352 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
ALDH1A1P00352 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
ALDH1A1P00352 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC19.96■□□□□ 0.79
ALDH1A1P00352 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.96■□□□□ 0.79
ALDH1A1P00352 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.96■□□□□ 0.79
ALDH1A1P00352 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC19.96■□□□□ 0.79
ALDH1A1P00352 NOP2-220ENST00000545915 630 ntTSL 2 BASIC19.96■□□□□ 0.79
ALDH1A1P00352 AL135744.1-201ENST00000565098 629 ntBASIC19.96■□□□□ 0.79
ALDH1A1P00352 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ALDH1A1P00352 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ALDH1A1P00352 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ALDH1A1P00352 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
ALDH1A1P00352 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
ALDH1A1P00352 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ALDH1A1P00352 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ALDH1A1P00352 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ALDH1A1P00352 ANO7L1-203ENST00000602586 1720 ntBASIC19.96■□□□□ 0.79
ALDH1A1P00352 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ALDH1A1P00352 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.95■□□□□ 0.79
ALDH1A1P00352 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.95■□□□□ 0.79
ALDH1A1P00352 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALDH1A1P00352 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
ALDH1A1P00352 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALDH1A1P00352 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALDH1A1P00352 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALDH1A1P00352 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.95■□□□□ 0.78
ALDH1A1P00352 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALDH1A1P00352 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms