Protein–RNA interactions for Protein: O95777

LSM8, U6 snRNA-associated Sm-like protein LSm8, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8O95777 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LSM8O95777 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.61■□□□□ 0.57
LSM8O95777 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
LSM8O95777 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
LSM8O95777 AC111152.3-201ENST00000569699 673 ntBASIC18.61■□□□□ 0.57
LSM8O95777 AC109462.3-201ENST00000573934 613 ntBASIC18.61■□□□□ 0.57
LSM8O95777 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
LSM8O95777 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
LSM8O95777 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM8O95777 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LSM8O95777 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM8O95777 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM8O95777 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.61■□□□□ 0.57
LSM8O95777 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM8O95777 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
LSM8O95777 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM8O95777 NSUN5P1-202ENST00000421140 1535 ntBASIC18.6■□□□□ 0.57
LSM8O95777 NSUN5P2-203ENST00000457352 1529 ntBASIC18.6■□□□□ 0.57
LSM8O95777 TP73-AS1-210ENST00000637775 1455 ntBASIC18.6■□□□□ 0.57
LSM8O95777 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM8O95777 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM8O95777 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM8O95777 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LSM8O95777 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LSM8O95777 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM8O95777 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
LSM8O95777 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM8O95777 IGHV3-47-201ENST00000425060 335 ntBASIC18.6■□□□□ 0.57
LSM8O95777 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.6■□□□□ 0.57
LSM8O95777 MINOS1P3-201ENST00000457048 203 ntBASIC18.6■□□□□ 0.57
LSM8O95777 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
LSM8O95777 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.6■□□□□ 0.57
LSM8O95777 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.6■□□□□ 0.57
LSM8O95777 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LSM8O95777 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LSM8O95777 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.6■□□□□ 0.57
LSM8O95777 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM8O95777 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.6■□□□□ 0.57
LSM8O95777 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM8O95777 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.6■□□□□ 0.57
LSM8O95777 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM8O95777 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LSM8O95777 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LSM8O95777 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LSM8O95777 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.59■□□□□ 0.57
LSM8O95777 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM8O95777 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.59■□□□□ 0.57
LSM8O95777 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.59■□□□□ 0.57
LSM8O95777 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM8O95777 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LSM8O95777 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LSM8O95777 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.59■□□□□ 0.57
LSM8O95777 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.59■□□□□ 0.57
LSM8O95777 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LSM8O95777 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM8O95777 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.59■□□□□ 0.57
LSM8O95777 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM8O95777 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.59■□□□□ 0.57
LSM8O95777 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
LSM8O95777 BNIP3P18-201ENST00000593976 575 ntBASIC18.59■□□□□ 0.57
LSM8O95777 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM8O95777 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM8O95777 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM8O95777 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LSM8O95777 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM8O95777 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.59■□□□□ 0.57
LSM8O95777 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.59■□□□□ 0.57
LSM8O95777 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM8O95777 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
LSM8O95777 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.59■□□□□ 0.57
LSM8O95777 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
LSM8O95777 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.58■□□□□ 0.57
LSM8O95777 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.58■□□□□ 0.57
LSM8O95777 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
LSM8O95777 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.58■□□□□ 0.57
LSM8O95777 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.58■□□□□ 0.57
LSM8O95777 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LSM8O95777 AC108860.2-201ENST00000562760 2183 ntBASIC18.58■□□□□ 0.57
LSM8O95777 AC020916.1-201ENST00000587762 1774 ntBASIC18.58■□□□□ 0.57
LSM8O95777 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.58■□□□□ 0.57
LSM8O95777 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
LSM8O95777 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.58■□□□□ 0.56
LSM8O95777 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LSM8O95777 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.58■□□□□ 0.56
LSM8O95777 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.58■□□□□ 0.56
LSM8O95777 AC012615.1-201ENST00000565797 1299 ntBASIC18.58■□□□□ 0.56
LSM8O95777 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.58■□□□□ 0.56
LSM8O95777 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.58■□□□□ 0.56
LSM8O95777 AC092329.2-201ENST00000598402 547 ntBASIC18.58■□□□□ 0.56
LSM8O95777 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
LSM8O95777 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.58■□□□□ 0.56
LSM8O95777 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.58■□□□□ 0.56
LSM8O95777 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.58■□□□□ 0.56
LSM8O95777 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
LSM8O95777 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.58■□□□□ 0.56
LSM8O95777 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LSM8O95777 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
LSM8O95777 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.58■□□□□ 0.56
LSM8O95777 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LSM8O95777 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms