Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFPL1O75677 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFPL1O75677 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFPL1O75677 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.72■□□□□ 0.43
RFPL1O75677 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.72■□□□□ 0.43
RFPL1O75677 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.72■□□□□ 0.43
RFPL1O75677 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFPL1O75677 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFPL1O75677 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFPL1O75677 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.72■□□□□ 0.43
RFPL1O75677 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFPL1O75677 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFPL1O75677 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFPL1O75677 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFPL1O75677 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.72■□□□□ 0.43
RFPL1O75677 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.72■□□□□ 0.43
RFPL1O75677 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.72■□□□□ 0.43
RFPL1O75677 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.72■□□□□ 0.43
RFPL1O75677 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.72■□□□□ 0.43
RFPL1O75677 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.72■□□□□ 0.43
RFPL1O75677 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.72■□□□□ 0.43
RFPL1O75677 CLEC4GP1-201ENST00000596555 870 ntBASIC17.72■□□□□ 0.43
RFPL1O75677 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFPL1O75677 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
RFPL1O75677 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFPL1O75677 AL691432.3-201ENST00000621860 400 ntBASIC17.72■□□□□ 0.43
RFPL1O75677 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RFPL1O75677 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFPL1O75677 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RFPL1O75677 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFPL1O75677 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.72■□□□□ 0.43
RFPL1O75677 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.72■□□□□ 0.43
RFPL1O75677 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFPL1O75677 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFPL1O75677 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFPL1O75677 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFPL1O75677 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.71■□□□□ 0.43
RFPL1O75677 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RFPL1O75677 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFPL1O75677 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RFPL1O75677 AL118508.1-201ENST00000613502 2345 ntBASIC17.71■□□□□ 0.43
RFPL1O75677 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RFPL1O75677 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RFPL1O75677 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFPL1O75677 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFPL1O75677 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.71■□□□□ 0.43
RFPL1O75677 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFPL1O75677 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFPL1O75677 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFPL1O75677 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFPL1O75677 KRT18P65-201ENST00000439811 1286 ntBASIC17.71■□□□□ 0.43
RFPL1O75677 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.71■□□□□ 0.43
RFPL1O75677 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.71■□□□□ 0.43
RFPL1O75677 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFPL1O75677 ZNF444P1-201ENST00000559497 298 ntBASIC17.71■□□□□ 0.43
RFPL1O75677 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
RFPL1O75677 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.71■□□□□ 0.43
RFPL1O75677 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.71■□□□□ 0.43
RFPL1O75677 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFPL1O75677 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
RFPL1O75677 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFPL1O75677 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
RFPL1O75677 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RFPL1O75677 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFPL1O75677 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.71■□□□□ 0.43
RFPL1O75677 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RFPL1O75677 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
RFPL1O75677 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFPL1O75677 AC106886.4-201ENST00000623557 2502 ntBASIC17.7■□□□□ 0.42
RFPL1O75677 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFPL1O75677 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFPL1O75677 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.7■□□□□ 0.42
RFPL1O75677 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
RFPL1O75677 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFPL1O75677 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFPL1O75677 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFPL1O75677 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFPL1O75677 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.7■□□□□ 0.42
RFPL1O75677 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFPL1O75677 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.7■□□□□ 0.42
RFPL1O75677 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFPL1O75677 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFPL1O75677 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.7■□□□□ 0.42
RFPL1O75677 STARP1-201ENST00000397973 869 ntBASIC17.7■□□□□ 0.42
RFPL1O75677 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFPL1O75677 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.7■□□□□ 0.42
RFPL1O75677 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFPL1O75677 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.7■□□□□ 0.42
RFPL1O75677 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFPL1O75677 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFPL1O75677 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFPL1O75677 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.7■□□□□ 0.42
RFPL1O75677 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFPL1O75677 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFPL1O75677 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.7■□□□□ 0.42
RFPL1O75677 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RFPL1O75677 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFPL1O75677 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFPL1O75677 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RFPL1O75677 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms