Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCMT2O60294 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.87■□□□□ 0.29
LCMT2O60294 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LCMT2O60294 AC103564.2-201ENST00000432853 1299 ntBASIC16.87■□□□□ 0.29
LCMT2O60294 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.87■□□□□ 0.29
LCMT2O60294 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.87■□□□□ 0.29
LCMT2O60294 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCMT2O60294 KRT18P31-201ENST00000506277 1292 ntBASIC16.87■□□□□ 0.29
LCMT2O60294 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.87■□□□□ 0.29
LCMT2O60294 AL591684.3-201ENST00000605187 298 ntBASIC16.87■□□□□ 0.29
LCMT2O60294 AL732292.2-201ENST00000609649 430 ntBASIC16.87■□□□□ 0.29
LCMT2O60294 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.87■□□□□ 0.29
LCMT2O60294 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCMT2O60294 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCMT2O60294 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LCMT2O60294 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCMT2O60294 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCMT2O60294 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.87■□□□□ 0.29
LCMT2O60294 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.87■□□□□ 0.29
LCMT2O60294 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.87■□□□□ 0.29
LCMT2O60294 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCMT2O60294 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LCMT2O60294 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.87■□□□□ 0.29
LCMT2O60294 KRT8P10-201ENST00000450021 1447 ntBASIC16.87■□□□□ 0.29
LCMT2O60294 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCMT2O60294 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
LCMT2O60294 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
LCMT2O60294 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LCMT2O60294 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LCMT2O60294 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.86■□□□□ 0.29
LCMT2O60294 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
LCMT2O60294 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LCMT2O60294 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.86■□□□□ 0.29
LCMT2O60294 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.86■□□□□ 0.29
LCMT2O60294 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.86■□□□□ 0.29
LCMT2O60294 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LCMT2O60294 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
LCMT2O60294 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.86■□□□□ 0.29
LCMT2O60294 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LCMT2O60294 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LCMT2O60294 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
LCMT2O60294 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.86■□□□□ 0.29
LCMT2O60294 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LCMT2O60294 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LCMT2O60294 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LCMT2O60294 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LCMT2O60294 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LCMT2O60294 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LCMT2O60294 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.86■□□□□ 0.29
LCMT2O60294 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
LCMT2O60294 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LCMT2O60294 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.86■□□□□ 0.29
LCMT2O60294 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.86■□□□□ 0.29
LCMT2O60294 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.86■□□□□ 0.29
LCMT2O60294 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.86■□□□□ 0.29
LCMT2O60294 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
LCMT2O60294 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LCMT2O60294 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LCMT2O60294 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LCMT2O60294 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LCMT2O60294 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LCMT2O60294 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
LCMT2O60294 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LCMT2O60294 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LCMT2O60294 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LCMT2O60294 HCG11-201ENST00000411553 5696 ntBASIC16.85■□□□□ 0.29
LCMT2O60294 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.85■□□□□ 0.29
LCMT2O60294 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.85■□□□□ 0.29
LCMT2O60294 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LCMT2O60294 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LCMT2O60294 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
LCMT2O60294 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LCMT2O60294 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LCMT2O60294 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LCMT2O60294 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LCMT2O60294 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LCMT2O60294 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.85■□□□□ 0.29
LCMT2O60294 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.85■□□□□ 0.29
LCMT2O60294 DUSP5P1-201ENST00000441325 1139 ntBASIC16.85■□□□□ 0.29
LCMT2O60294 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.85■□□□□ 0.29
LCMT2O60294 AC132008.2-207ENST00000454517 770 ntBASIC16.85■□□□□ 0.29
LCMT2O60294 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LCMT2O60294 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.85■□□□□ 0.29
LCMT2O60294 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.85■□□□□ 0.29
LCMT2O60294 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.85■□□□□ 0.29
LCMT2O60294 AL121772.3-201ENST00000610840 674 ntBASIC16.85■□□□□ 0.29
LCMT2O60294 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.85■□□□□ 0.29
LCMT2O60294 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
LCMT2O60294 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
LCMT2O60294 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
LCMT2O60294 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.85■□□□□ 0.29
LCMT2O60294 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LCMT2O60294 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LCMT2O60294 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LCMT2O60294 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LCMT2O60294 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LCMT2O60294 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LCMT2O60294 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LCMT2O60294 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LCMT2O60294 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms