Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXN1O15353 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXN1O15353 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FOXN1O15353 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXN1O15353 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXN1O15353 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXN1O15353 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXN1O15353 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXN1O15353 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXN1O15353 AC026471.1-201ENST00000564629 3026 ntBASIC21.03■□□□□ 0.96
FOXN1O15353 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.03■□□□□ 0.96
FOXN1O15353 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.03■□□□□ 0.96
FOXN1O15353 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FOXN1O15353 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXN1O15353 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXN1O15353 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
FOXN1O15353 KRT18P27-201ENST00000427733 1299 ntBASIC21.03■□□□□ 0.96
FOXN1O15353 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC21.03■□□□□ 0.96
FOXN1O15353 AC093520.2-201ENST00000561830 333 ntBASIC21.03■□□□□ 0.96
FOXN1O15353 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.03■□□□□ 0.96
FOXN1O15353 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
FOXN1O15353 PGM5P2-202ENST00000637225 1043 ntBASIC21.03■□□□□ 0.96
FOXN1O15353 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.03■□□□□ 0.96
FOXN1O15353 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXN1O15353 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FOXN1O15353 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.03■□□□□ 0.96
FOXN1O15353 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FOXN1O15353 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXN1O15353 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FOXN1O15353 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC21.03■□□□□ 0.96
FOXN1O15353 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXN1O15353 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXN1O15353 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXN1O15353 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXN1O15353 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FOXN1O15353 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXN1O15353 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXN1O15353 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.02■□□□□ 0.96
FOXN1O15353 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXN1O15353 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC21.02■□□□□ 0.96
FOXN1O15353 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FOXN1O15353 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
FOXN1O15353 AC002472.2-201ENST00000442739 958 ntBASIC21.02■□□□□ 0.96
FOXN1O15353 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FOXN1O15353 OARD1-208ENST00000469104 704 ntTSL 2 BASIC21.02■□□□□ 0.96
FOXN1O15353 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXN1O15353 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXN1O15353 AC025678.2-201ENST00000562061 970 ntBASIC21.02■□□□□ 0.96
FOXN1O15353 PDPK2P-202ENST00000562415 1191 ntBASIC21.02■□□□□ 0.96
FOXN1O15353 AC084346.2-201ENST00000607097 949 ntBASIC21.02■□□□□ 0.96
FOXN1O15353 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FOXN1O15353 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC21.02■□□□□ 0.96
FOXN1O15353 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.02■□□□□ 0.96
FOXN1O15353 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXN1O15353 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXN1O15353 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
FOXN1O15353 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FOXN1O15353 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
FOXN1O15353 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
FOXN1O15353 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.02■□□□□ 0.95
FOXN1O15353 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
FOXN1O15353 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.95
FOXN1O15353 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.01■□□□□ 0.95
FOXN1O15353 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXN1O15353 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.01■□□□□ 0.95
FOXN1O15353 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
FOXN1O15353 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
FOXN1O15353 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
FOXN1O15353 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXN1O15353 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXN1O15353 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXN1O15353 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FOXN1O15353 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC21.01■□□□□ 0.95
FOXN1O15353 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC21.01■□□□□ 0.95
FOXN1O15353 AC093214.1-201ENST00000511688 1107 ntBASIC21.01■□□□□ 0.95
FOXN1O15353 AC109322.1-201ENST00000524499 1264 ntBASIC21.01■□□□□ 0.95
FOXN1O15353 MAL2-202ENST00000531508 892 ntTSL 3 BASIC21.01■□□□□ 0.95
FOXN1O15353 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXN1O15353 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FOXN1O15353 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
FOXN1O15353 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXN1O15353 NOC2LP1-202ENST00000452600 2235 ntBASIC21.01■□□□□ 0.95
FOXN1O15353 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.01■□□□□ 0.95
FOXN1O15353 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FOXN1O15353 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.01■□□□□ 0.95
FOXN1O15353 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXN1O15353 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC21■□□□□ 0.95
FOXN1O15353 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
FOXN1O15353 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXN1O15353 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXN1O15353 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
FOXN1O15353 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXN1O15353 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC21■□□□□ 0.95
FOXN1O15353 AC073621.1-201ENST00000392730 636 ntBASIC21■□□□□ 0.95
FOXN1O15353 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21■□□□□ 0.95
FOXN1O15353 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC21■□□□□ 0.95
FOXN1O15353 INGX-202ENST00000489074 768 ntBASIC21■□□□□ 0.95
FOXN1O15353 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
FOXN1O15353 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
FOXN1O15353 AL138831.2-201ENST00000606564 490 ntBASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms