Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFA1O15239 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFA1O15239 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFA1O15239 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
NDUFA1O15239 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC12.1□□□□□ -0.47
NDUFA1O15239 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFA1O15239 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC12.1□□□□□ -0.47
NDUFA1O15239 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFA1O15239 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFA1O15239 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFA1O15239 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFA1O15239 ABHD17AP1-201ENST00000358206 933 ntBASIC12.1□□□□□ -0.47
NDUFA1O15239 PEX7-202ENST00000367756 680 ntTSL 3 BASIC12.1□□□□□ -0.47
NDUFA1O15239 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC12.1□□□□□ -0.47
NDUFA1O15239 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
NDUFA1O15239 RPS2P55-201ENST00000397318 883 ntBASIC12.1□□□□□ -0.47
NDUFA1O15239 AC107956.1-201ENST00000494359 873 ntBASIC12.1□□□□□ -0.47
NDUFA1O15239 DUTP2-201ENST00000519164 463 ntBASIC12.1□□□□□ -0.47
NDUFA1O15239 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC12.1□□□□□ -0.47
NDUFA1O15239 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC12.1□□□□□ -0.47
NDUFA1O15239 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC12.1□□□□□ -0.47
NDUFA1O15239 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC12.1□□□□□ -0.47
NDUFA1O15239 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
NDUFA1O15239 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFA1O15239 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFA1O15239 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFA1O15239 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFA1O15239 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFA1O15239 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
NDUFA1O15239 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFA1O15239 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC12.1□□□□□ -0.47
NDUFA1O15239 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC12.1□□□□□ -0.47
NDUFA1O15239 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFA1O15239 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFA1O15239 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
NDUFA1O15239 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFA1O15239 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
NDUFA1O15239 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC12.1□□□□□ -0.47
NDUFA1O15239 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC12.1□□□□□ -0.47
NDUFA1O15239 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NDUFA1O15239 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NDUFA1O15239 AC036111.1-201ENST00000533973 1582 ntBASIC12.09□□□□□ -0.47
NDUFA1O15239 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NDUFA1O15239 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC12.09□□□□□ -0.47
NDUFA1O15239 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NDUFA1O15239 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NDUFA1O15239 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
NDUFA1O15239 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
NDUFA1O15239 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
NDUFA1O15239 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NDUFA1O15239 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NDUFA1O15239 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NDUFA1O15239 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NDUFA1O15239 AL158047.1-201ENST00000445918 881 ntBASIC12.09□□□□□ -0.47
NDUFA1O15239 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NDUFA1O15239 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NDUFA1O15239 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC12.09□□□□□ -0.47
NDUFA1O15239 GRAP-204ENST00000573099 846 ntTSL 3 BASIC12.09□□□□□ -0.47
NDUFA1O15239 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC12.09□□□□□ -0.47
NDUFA1O15239 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NDUFA1O15239 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
NDUFA1O15239 CYP51A1P1-201ENST00000492267 1507 ntBASIC12.09□□□□□ -0.47
NDUFA1O15239 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NDUFA1O15239 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NDUFA1O15239 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC12.09□□□□□ -0.47
NDUFA1O15239 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC12.09□□□□□ -0.47
NDUFA1O15239 PCDH8P1-201ENST00000428983 2773 ntBASIC12.09□□□□□ -0.47
NDUFA1O15239 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NDUFA1O15239 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
NDUFA1O15239 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NDUFA1O15239 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
NDUFA1O15239 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NDUFA1O15239 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NDUFA1O15239 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NDUFA1O15239 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
NDUFA1O15239 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NDUFA1O15239 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.09□□□□□ -0.47
NDUFA1O15239 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC12.09□□□□□ -0.47
NDUFA1O15239 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC12.08□□□□□ -0.47
NDUFA1O15239 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC12.08□□□□□ -0.47
NDUFA1O15239 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
NDUFA1O15239 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC12.08□□□□□ -0.47
NDUFA1O15239 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
NDUFA1O15239 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NDUFA1O15239 LINC01126-201ENST00000623515 1646 ntBASIC12.08□□□□□ -0.48
NDUFA1O15239 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
NDUFA1O15239 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NDUFA1O15239 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
NDUFA1O15239 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
NDUFA1O15239 TPR-209ENST00000613151 2478 ntTSL 5 BASIC12.08□□□□□ -0.48
NDUFA1O15239 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
NDUFA1O15239 KRT18P23-201ENST00000435622 1283 ntBASIC12.08□□□□□ -0.48
NDUFA1O15239 TSPY20P-201ENST00000450910 630 ntBASIC12.08□□□□□ -0.48
NDUFA1O15239 FDX2-206ENST00000492239 773 ntTSL 2 BASIC12.08□□□□□ -0.48
NDUFA1O15239 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC12.08□□□□□ -0.48
NDUFA1O15239 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC12.08□□□□□ -0.48
NDUFA1O15239 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC12.08□□□□□ -0.48
NDUFA1O15239 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC12.08□□□□□ -0.48
NDUFA1O15239 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NDUFA1O15239 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms