Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDX4O14627 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CDX4O14627 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDX4O14627 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.89■□□□□ 0.29
CDX4O14627 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDX4O14627 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CDX4O14627 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDX4O14627 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDX4O14627 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDX4O14627 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDX4O14627 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDX4O14627 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDX4O14627 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDX4O14627 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDX4O14627 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDX4O14627 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDX4O14627 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDX4O14627 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDX4O14627 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.88■□□□□ 0.29
CDX4O14627 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDX4O14627 KLF2P3-201ENST00000451977 1087 ntBASIC16.88■□□□□ 0.29
CDX4O14627 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.88■□□□□ 0.29
CDX4O14627 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.88■□□□□ 0.29
CDX4O14627 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.88■□□□□ 0.29
CDX4O14627 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.88■□□□□ 0.29
CDX4O14627 AP001059.3-201ENST00000619053 235 ntBASIC16.88■□□□□ 0.29
CDX4O14627 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.88■□□□□ 0.29
CDX4O14627 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDX4O14627 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.88■□□□□ 0.29
CDX4O14627 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDX4O14627 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDX4O14627 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDX4O14627 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDX4O14627 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.87■□□□□ 0.29
CDX4O14627 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDX4O14627 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CDX4O14627 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDX4O14627 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDX4O14627 AC126763.1-201ENST00000552015 2118 ntBASIC16.87■□□□□ 0.29
CDX4O14627 BX276092.7-203ENST00000637198 1536 ntBASIC16.87■□□□□ 0.29
CDX4O14627 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDX4O14627 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDX4O14627 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDX4O14627 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDX4O14627 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CDX4O14627 ACTG1P4-201ENST00000425123 1122 ntBASIC16.87■□□□□ 0.29
CDX4O14627 FAM207CP-201ENST00000443486 507 ntBASIC16.87■□□□□ 0.29
CDX4O14627 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.87■□□□□ 0.29
CDX4O14627 AC079140.1-201ENST00000508039 487 ntBASIC16.87■□□□□ 0.29
CDX4O14627 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.87■□□□□ 0.29
CDX4O14627 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.87■□□□□ 0.29
CDX4O14627 LINC02560-201ENST00000596379 459 ntBASIC16.87■□□□□ 0.29
CDX4O14627 AC008761.3-201ENST00000624803 892 ntBASIC16.87■□□□□ 0.29
CDX4O14627 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDX4O14627 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDX4O14627 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDX4O14627 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.87■□□□□ 0.29
CDX4O14627 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.87■□□□□ 0.29
CDX4O14627 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDX4O14627 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDX4O14627 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDX4O14627 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CDX4O14627 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CDX4O14627 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CDX4O14627 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
CDX4O14627 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.86■□□□□ 0.29
CDX4O14627 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDX4O14627 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.86■□□□□ 0.29
CDX4O14627 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDX4O14627 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.86■□□□□ 0.29
CDX4O14627 GPS2P2-201ENST00000430745 888 ntBASIC16.86■□□□□ 0.29
CDX4O14627 AC007274.1-201ENST00000439805 662 ntBASIC16.86■□□□□ 0.29
CDX4O14627 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.86■□□□□ 0.29
CDX4O14627 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDX4O14627 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.86■□□□□ 0.29
CDX4O14627 AC243562.1-201ENST00000560672 389 ntBASIC16.86■□□□□ 0.29
CDX4O14627 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.86■□□□□ 0.29
CDX4O14627 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.86■□□□□ 0.29
CDX4O14627 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDX4O14627 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDX4O14627 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.86■□□□□ 0.29
CDX4O14627 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDX4O14627 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDX4O14627 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.86■□□□□ 0.29
CDX4O14627 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDX4O14627 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.85■□□□□ 0.29
CDX4O14627 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.85■□□□□ 0.29
CDX4O14627 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDX4O14627 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.85■□□□□ 0.29
CDX4O14627 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDX4O14627 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDX4O14627 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDX4O14627 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDX4O14627 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
CDX4O14627 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDX4O14627 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDX4O14627 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDX4O14627 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.85■□□□□ 0.29
CDX4O14627 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.85■□□□□ 0.29
CDX4O14627 AC107890.1-201ENST00000422478 521 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms