Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN4O14493 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.65■□□□□ 0.26
CLDN4O14493 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN4O14493 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.65■□□□□ 0.26
CLDN4O14493 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN4O14493 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN4O14493 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN4O14493 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CLDN4O14493 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN4O14493 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CLDN4O14493 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN4O14493 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN4O14493 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CLDN4O14493 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN4O14493 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CLDN4O14493 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CLDN4O14493 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN4O14493 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN4O14493 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
CLDN4O14493 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CLDN4O14493 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.64■□□□□ 0.26
CLDN4O14493 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CLDN4O14493 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN4O14493 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN4O14493 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN4O14493 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN4O14493 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN4O14493 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN4O14493 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
CLDN4O14493 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN4O14493 TSPY19P-201ENST00000418461 509 ntBASIC16.64■□□□□ 0.25
CLDN4O14493 TSPY18P-201ENST00000441642 509 ntBASIC16.64■□□□□ 0.25
CLDN4O14493 KRT18P31-201ENST00000506277 1292 ntBASIC16.64■□□□□ 0.25
CLDN4O14493 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.64■□□□□ 0.25
CLDN4O14493 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.64■□□□□ 0.25
CLDN4O14493 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.64■□□□□ 0.25
CLDN4O14493 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.64■□□□□ 0.25
CLDN4O14493 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.64■□□□□ 0.25
CLDN4O14493 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CLDN4O14493 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CLDN4O14493 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN4O14493 AC018470.1-201ENST00000624790 3129 ntBASIC16.64■□□□□ 0.25
CLDN4O14493 INTS4P1-201ENST00000438455 1935 ntBASIC16.64■□□□□ 0.25
CLDN4O14493 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CLDN4O14493 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN4O14493 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN4O14493 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN4O14493 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN4O14493 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN4O14493 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN4O14493 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN4O14493 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN4O14493 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CLDN4O14493 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CLDN4O14493 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN4O14493 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN4O14493 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN4O14493 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN4O14493 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN4O14493 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN4O14493 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.63■□□□□ 0.25
CLDN4O14493 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN4O14493 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLDN4O14493 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN4O14493 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
CLDN4O14493 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN4O14493 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.63■□□□□ 0.25
CLDN4O14493 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.63■□□□□ 0.25
CLDN4O14493 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN4O14493 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CLDN4O14493 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CLDN4O14493 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CLDN4O14493 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLDN4O14493 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN4O14493 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN4O14493 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.63■□□□□ 0.25
CLDN4O14493 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CLDN4O14493 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN4O14493 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN4O14493 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN4O14493 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN4O14493 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN4O14493 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN4O14493 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN4O14493 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN4O14493 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN4O14493 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN4O14493 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN4O14493 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
CLDN4O14493 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN4O14493 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN4O14493 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN4O14493 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN4O14493 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN4O14493 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN4O14493 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CLDN4O14493 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN4O14493 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
CLDN4O14493 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN4O14493 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms