Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.46■□□□□ 0.39
IFRD1O00458 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
IFRD1O00458 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
IFRD1O00458 AC012317.2-201ENST00000623305 2251 ntBASIC17.46■□□□□ 0.39
IFRD1O00458 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IFRD1O00458 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
IFRD1O00458 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.46■□□□□ 0.39
IFRD1O00458 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
IFRD1O00458 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.46■□□□□ 0.38
IFRD1O00458 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
IFRD1O00458 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
IFRD1O00458 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFRD1O00458 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFRD1O00458 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.45■□□□□ 0.38
IFRD1O00458 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.45■□□□□ 0.38
IFRD1O00458 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFRD1O00458 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.45■□□□□ 0.38
IFRD1O00458 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFRD1O00458 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFRD1O00458 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFRD1O00458 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFRD1O00458 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
IFRD1O00458 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
IFRD1O00458 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.45■□□□□ 0.38
IFRD1O00458 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.45■□□□□ 0.38
IFRD1O00458 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.45■□□□□ 0.38
IFRD1O00458 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IFRD1O00458 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.45■□□□□ 0.38
IFRD1O00458 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.45■□□□□ 0.38
IFRD1O00458 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFRD1O00458 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.45■□□□□ 0.38
IFRD1O00458 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFRD1O00458 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFRD1O00458 NSUN5P1-202ENST00000421140 1535 ntBASIC17.45■□□□□ 0.38
IFRD1O00458 NSUN5P2-203ENST00000457352 1529 ntBASIC17.45■□□□□ 0.38
IFRD1O00458 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.45■□□□□ 0.38
IFRD1O00458 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFRD1O00458 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFRD1O00458 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFRD1O00458 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFRD1O00458 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
IFRD1O00458 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.45■□□□□ 0.38
IFRD1O00458 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
IFRD1O00458 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.44■□□□□ 0.38
IFRD1O00458 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFRD1O00458 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFRD1O00458 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFRD1O00458 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.44■□□□□ 0.38
IFRD1O00458 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
IFRD1O00458 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFRD1O00458 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFRD1O00458 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.44■□□□□ 0.38
IFRD1O00458 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
IFRD1O00458 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IFRD1O00458 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
IFRD1O00458 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IFRD1O00458 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFRD1O00458 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.44■□□□□ 0.38
IFRD1O00458 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFRD1O00458 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFRD1O00458 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IFRD1O00458 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.44■□□□□ 0.38
IFRD1O00458 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFRD1O00458 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFRD1O00458 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IFRD1O00458 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFRD1O00458 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
IFRD1O00458 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.44■□□□□ 0.38
IFRD1O00458 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
IFRD1O00458 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.44■□□□□ 0.38
IFRD1O00458 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.44■□□□□ 0.38
IFRD1O00458 AP005901.3-202ENST00000581653 237 ntBASIC17.44■□□□□ 0.38
IFRD1O00458 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.44■□□□□ 0.38
IFRD1O00458 AC099336.1-202ENST00000602961 463 ntBASIC17.44■□□□□ 0.38
IFRD1O00458 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IFRD1O00458 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFRD1O00458 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFRD1O00458 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFRD1O00458 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.44■□□□□ 0.38
IFRD1O00458 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
IFRD1O00458 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
IFRD1O00458 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFRD1O00458 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.44■□□□□ 0.38
IFRD1O00458 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFRD1O00458 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
IFRD1O00458 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
IFRD1O00458 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFRD1O00458 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFRD1O00458 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFRD1O00458 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.44■□□□□ 0.38
IFRD1O00458 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFRD1O00458 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IFRD1O00458 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IFRD1O00458 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFRD1O00458 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
IFRD1O00458 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IFRD1O00458 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFRD1O00458 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFRD1O00458 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFRD1O00458 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms