Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.11■□□□□ 0.97
NFKBIEO00221 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NFKBIEO00221 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
NFKBIEO00221 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NFKBIEO00221 HARS-203ENST00000431330 1774 ntTSL 2 BASIC21.1■□□□□ 0.97
NFKBIEO00221 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NFKBIEO00221 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC21.1■□□□□ 0.97
NFKBIEO00221 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.1■□□□□ 0.97
NFKBIEO00221 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.1■□□□□ 0.97
NFKBIEO00221 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NFKBIEO00221 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.1■□□□□ 0.97
NFKBIEO00221 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NFKBIEO00221 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NFKBIEO00221 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NFKBIEO00221 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC21.1■□□□□ 0.97
NFKBIEO00221 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC21.1■□□□□ 0.97
NFKBIEO00221 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC21.1■□□□□ 0.97
NFKBIEO00221 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC21.1■□□□□ 0.97
NFKBIEO00221 SERBP1P5-201ENST00000510079 1181 ntBASIC21.1■□□□□ 0.97
NFKBIEO00221 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC21.1■□□□□ 0.97
NFKBIEO00221 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC21.1■□□□□ 0.97
NFKBIEO00221 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
NFKBIEO00221 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NFKBIEO00221 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC21.1■□□□□ 0.97
NFKBIEO00221 LINC01225-203ENST00000563550 1244 ntBASIC21.1■□□□□ 0.97
NFKBIEO00221 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC21.1■□□□□ 0.97
NFKBIEO00221 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
NFKBIEO00221 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NFKBIEO00221 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NFKBIEO00221 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
NFKBIEO00221 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NFKBIEO00221 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NFKBIEO00221 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC21.1■□□□□ 0.97
NFKBIEO00221 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NFKBIEO00221 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
NFKBIEO00221 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC21.09■□□□□ 0.97
NFKBIEO00221 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.09■□□□□ 0.97
NFKBIEO00221 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NFKBIEO00221 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NFKBIEO00221 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC21.09■□□□□ 0.97
NFKBIEO00221 AKAP8P1-201ENST00000434743 1349 ntBASIC21.09■□□□□ 0.97
NFKBIEO00221 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
NFKBIEO00221 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.09■□□□□ 0.97
NFKBIEO00221 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NFKBIEO00221 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NFKBIEO00221 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NFKBIEO00221 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
NFKBIEO00221 NME2P1-201ENST00000426182 414 ntBASIC21.09■□□□□ 0.97
NFKBIEO00221 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.09■□□□□ 0.97
NFKBIEO00221 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.09■□□□□ 0.97
NFKBIEO00221 AC097493.3-201ENST00000509725 367 ntBASIC21.09■□□□□ 0.97
NFKBIEO00221 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC21.09■□□□□ 0.97
NFKBIEO00221 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC21.09■□□□□ 0.97
NFKBIEO00221 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NFKBIEO00221 AL596325.1-201ENST00000563991 1082 ntBASIC21.09■□□□□ 0.97
NFKBIEO00221 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NFKBIEO00221 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NFKBIEO00221 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.09■□□□□ 0.97
NFKBIEO00221 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.09■□□□□ 0.97
NFKBIEO00221 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NFKBIEO00221 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.08■□□□□ 0.97
NFKBIEO00221 AC129492.6-201ENST00000611383 1305 ntBASIC21.08■□□□□ 0.97
NFKBIEO00221 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NFKBIEO00221 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.08■□□□□ 0.97
NFKBIEO00221 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NFKBIEO00221 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NFKBIEO00221 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NFKBIEO00221 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NFKBIEO00221 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC21.08■□□□□ 0.97
NFKBIEO00221 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NFKBIEO00221 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
NFKBIEO00221 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.08■□□□□ 0.97
NFKBIEO00221 COX5BP8-201ENST00000416911 349 ntBASIC21.08■□□□□ 0.97
NFKBIEO00221 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC21.08■□□□□ 0.97
NFKBIEO00221 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NFKBIEO00221 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC21.08■□□□□ 0.97
NFKBIEO00221 THTPA-204ENST00000554970 569 ntTSL 4 BASIC21.08■□□□□ 0.97
NFKBIEO00221 THTPA-206ENST00000556015 535 ntTSL 3 BASIC21.08■□□□□ 0.97
NFKBIEO00221 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC21.08■□□□□ 0.97
NFKBIEO00221 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
NFKBIEO00221 AL645728.2-201ENST00000641974 660 ntBASIC21.08■□□□□ 0.97
NFKBIEO00221 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.08■□□□□ 0.96
NFKBIEO00221 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
NFKBIEO00221 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NFKBIEO00221 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC21.08■□□□□ 0.96
NFKBIEO00221 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC21.08■□□□□ 0.96
NFKBIEO00221 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
NFKBIEO00221 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.07■□□□□ 0.96
NFKBIEO00221 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NFKBIEO00221 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NFKBIEO00221 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.07■□□□□ 0.96
NFKBIEO00221 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NFKBIEO00221 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NFKBIEO00221 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NFKBIEO00221 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NFKBIEO00221 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NFKBIEO00221 AC092580.3-201ENST00000430932 139 ntBASIC21.07■□□□□ 0.96
NFKBIEO00221 AC107918.2-201ENST00000530817 355 ntBASIC21.07■□□□□ 0.96
NFKBIEO00221 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
NFKBIEO00221 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms