Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.85■□□□□ 0.45
AP3B1O00203 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
AP3B1O00203 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
AP3B1O00203 CROCCP2-202ENST00000412962 2773 ntBASIC17.85■□□□□ 0.45
AP3B1O00203 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP3B1O00203 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.85■□□□□ 0.45
AP3B1O00203 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP3B1O00203 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.84■□□□□ 0.45
AP3B1O00203 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP3B1O00203 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
AP3B1O00203 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
AP3B1O00203 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
AP3B1O00203 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP3B1O00203 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.84■□□□□ 0.45
AP3B1O00203 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP3B1O00203 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP3B1O00203 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
AP3B1O00203 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.84■□□□□ 0.45
AP3B1O00203 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
AP3B1O00203 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP3B1O00203 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP3B1O00203 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
AP3B1O00203 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
AP3B1O00203 DUX4L26-201ENST00000489078 1255 ntBASIC17.84■□□□□ 0.45
AP3B1O00203 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.84■□□□□ 0.45
AP3B1O00203 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP3B1O00203 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
AP3B1O00203 AL139327.4-201ENST00000612362 153 ntBASIC17.84■□□□□ 0.45
AP3B1O00203 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
AP3B1O00203 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.84■□□□□ 0.45
AP3B1O00203 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
AP3B1O00203 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP3B1O00203 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
AP3B1O00203 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.84■□□□□ 0.45
AP3B1O00203 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.84■□□□□ 0.45
AP3B1O00203 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.84■□□□□ 0.45
AP3B1O00203 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP3B1O00203 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
AP3B1O00203 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.83■□□□□ 0.45
AP3B1O00203 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
AP3B1O00203 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.83■□□□□ 0.45
AP3B1O00203 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
AP3B1O00203 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
AP3B1O00203 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.83■□□□□ 0.44
AP3B1O00203 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.83■□□□□ 0.44
AP3B1O00203 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP3B1O00203 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
AP3B1O00203 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP3B1O00203 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
AP3B1O00203 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP3B1O00203 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP3B1O00203 SPDYE13P-201ENST00000445314 798 ntBASIC17.83■□□□□ 0.44
AP3B1O00203 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.83■□□□□ 0.44
AP3B1O00203 AL136038.3-201ENST00000561909 1096 ntBASIC17.83■□□□□ 0.44
AP3B1O00203 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.83■□□□□ 0.44
AP3B1O00203 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
AP3B1O00203 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP3B1O00203 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP3B1O00203 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
AP3B1O00203 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
AP3B1O00203 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
AP3B1O00203 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
AP3B1O00203 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP3B1O00203 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
AP3B1O00203 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP3B1O00203 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
AP3B1O00203 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP3B1O00203 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
AP3B1O00203 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3B1O00203 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3B1O00203 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3B1O00203 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3B1O00203 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.82■□□□□ 0.44
AP3B1O00203 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3B1O00203 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3B1O00203 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3B1O00203 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3B1O00203 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP3B1O00203 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3B1O00203 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3B1O00203 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP3B1O00203 TSPY22P-201ENST00000427496 604 ntBASIC17.82■□□□□ 0.44
AP3B1O00203 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.82■□□□□ 0.44
AP3B1O00203 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.82■□□□□ 0.44
AP3B1O00203 IGHV3-52-201ENST00000519770 353 ntBASIC17.82■□□□□ 0.44
AP3B1O00203 AL353801.3-201ENST00000609898 542 ntBASIC17.82■□□□□ 0.44
AP3B1O00203 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
AP3B1O00203 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3B1O00203 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
AP3B1O00203 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.82■□□□□ 0.44
AP3B1O00203 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.82■□□□□ 0.44
AP3B1O00203 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.82■□□□□ 0.44
AP3B1O00203 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.82■□□□□ 0.44
AP3B1O00203 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP3B1O00203 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
AP3B1O00203 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3B1O00203 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.82■□□□□ 0.44
AP3B1O00203 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3B1O00203 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP3B1O00203 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms