Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 FAM220CP-201ENST00000395253 831 ntBASIC18.31■□□□□ 0.52
SRRM3A6NNA2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 PMS2P1-201ENST00000431037 1228 ntBASIC18.31■□□□□ 0.52
SRRM3A6NNA2 TSSC2-201ENST00000450217 709 ntBASIC18.31■□□□□ 0.52
SRRM3A6NNA2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SRRM3A6NNA2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 AP000523.1-201ENST00000398242 1049 ntBASIC18.3■□□□□ 0.52
SRRM3A6NNA2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 SPDYE13P-201ENST00000445314 798 ntBASIC18.3■□□□□ 0.52
SRRM3A6NNA2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 AL662844.1-201ENST00000546340 181 ntBASIC18.3■□□□□ 0.52
SRRM3A6NNA2 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 AL732292.2-201ENST00000609649 430 ntBASIC18.3■□□□□ 0.52
SRRM3A6NNA2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SRRM3A6NNA2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
SRRM3A6NNA2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SRRM3A6NNA2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
SRRM3A6NNA2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.29■□□□□ 0.52
SRRM3A6NNA2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.29■□□□□ 0.52
SRRM3A6NNA2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRRM3A6NNA2 PCDH8P1-201ENST00000428983 2773 ntBASIC18.29■□□□□ 0.52
SRRM3A6NNA2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRRM3A6NNA2 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRRM3A6NNA2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRRM3A6NNA2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.29■□□□□ 0.52
SRRM3A6NNA2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SRRM3A6NNA2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.29■□□□□ 0.52
SRRM3A6NNA2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRRM3A6NNA2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.29■□□□□ 0.52
SRRM3A6NNA2 HMGN1P19-201ENST00000436976 333 ntBASIC18.29■□□□□ 0.52
SRRM3A6NNA2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SRRM3A6NNA2 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.29■□□□□ 0.52
SRRM3A6NNA2 BX640515.1-201ENST00000617215 977 ntBASIC18.29■□□□□ 0.52
SRRM3A6NNA2 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.29■□□□□ 0.52
SRRM3A6NNA2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRRM3A6NNA2 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.29■□□□□ 0.52
SRRM3A6NNA2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SRRM3A6NNA2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SRRM3A6NNA2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRRM3A6NNA2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRRM3A6NNA2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SRRM3A6NNA2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.29■□□□□ 0.52
SRRM3A6NNA2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SRRM3A6NNA2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SRRM3A6NNA2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRRM3A6NNA2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRRM3A6NNA2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRRM3A6NNA2 KRT18P1-202ENST00000452408 1331 ntBASIC18.28■□□□□ 0.52
SRRM3A6NNA2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRRM3A6NNA2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SRRM3A6NNA2 UBALD1-205ENST00000590891 2641 ntBASIC18.28■□□□□ 0.52
SRRM3A6NNA2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.28■□□□□ 0.52
SRRM3A6NNA2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.28■□□□□ 0.52
SRRM3A6NNA2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.28■□□□□ 0.52
SRRM3A6NNA2 MIR1233-2-201ENST00000408138 82 ntBASIC18.28■□□□□ 0.52
SRRM3A6NNA2 MIR1233-1-201ENST00000408722 82 ntBASIC18.28■□□□□ 0.52
SRRM3A6NNA2 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.28■□□□□ 0.52
SRRM3A6NNA2 AP002469.2-201ENST00000531724 424 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms