Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
SSC5DA1L4H1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSC5DA1L4H1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSC5DA1L4H1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSC5DA1L4H1 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC20.36■□□□□ 0.85
SSC5DA1L4H1 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SSC5DA1L4H1 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SSC5DA1L4H1 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSC5DA1L4H1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.36■□□□□ 0.85
SSC5DA1L4H1 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC20.36■□□□□ 0.85
SSC5DA1L4H1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSC5DA1L4H1 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.36■□□□□ 0.85
SSC5DA1L4H1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SSC5DA1L4H1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.35■□□□□ 0.85
SSC5DA1L4H1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.35■□□□□ 0.85
SSC5DA1L4H1 AL135999.2-201ENST00000622438 1686 ntBASIC20.35■□□□□ 0.85
SSC5DA1L4H1 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.35■□□□□ 0.85
SSC5DA1L4H1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
SSC5DA1L4H1 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SSC5DA1L4H1 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SSC5DA1L4H1 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC20.35■□□□□ 0.85
SSC5DA1L4H1 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SSC5DA1L4H1 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SSC5DA1L4H1 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.35■□□□□ 0.85
SSC5DA1L4H1 PMS2P4-201ENST00000412466 1052 ntBASIC20.35■□□□□ 0.85
SSC5DA1L4H1 AC140658.5-201ENST00000438532 169 ntBASIC20.35■□□□□ 0.85
SSC5DA1L4H1 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC20.35■□□□□ 0.85
SSC5DA1L4H1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.35■□□□□ 0.85
SSC5DA1L4H1 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.35■□□□□ 0.85
SSC5DA1L4H1 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.35■□□□□ 0.85
SSC5DA1L4H1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.35■□□□□ 0.85
SSC5DA1L4H1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SSC5DA1L4H1 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.35■□□□□ 0.85
SSC5DA1L4H1 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SSC5DA1L4H1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.35■□□□□ 0.85
SSC5DA1L4H1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SSC5DA1L4H1 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SSC5DA1L4H1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SSC5DA1L4H1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SSC5DA1L4H1 BX323043.1-201ENST00000641006 1765 ntBASIC20.35■□□□□ 0.85
SSC5DA1L4H1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.35■□□□□ 0.85
SSC5DA1L4H1 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 FAM58DP-201ENST00000428076 619 ntBASIC20.34■□□□□ 0.85
SSC5DA1L4H1 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 COPE-202ENST00000349893 948 ntTSL 2 BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 TAF8-206ENST00000472818 719 ntTSL 2 BASIC20.34■□□□□ 0.85
SSC5DA1L4H1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSC5DA1L4H1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.33■□□□□ 0.85
SSC5DA1L4H1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SSC5DA1L4H1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSC5DA1L4H1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SSC5DA1L4H1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSC5DA1L4H1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSC5DA1L4H1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.33■□□□□ 0.85
SSC5DA1L4H1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.33■□□□□ 0.85
SSC5DA1L4H1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.33■□□□□ 0.85
SSC5DA1L4H1 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SSC5DA1L4H1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
SSC5DA1L4H1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SSC5DA1L4H1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.33■□□□□ 0.84
SSC5DA1L4H1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC20.33■□□□□ 0.84
SSC5DA1L4H1 AL020996.1-203ENST00000536896 2307 ntBASIC20.33■□□□□ 0.84
SSC5DA1L4H1 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
SSC5DA1L4H1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SSC5DA1L4H1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.33■□□□□ 0.84
SSC5DA1L4H1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SSC5DA1L4H1 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SSC5DA1L4H1 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.84
SSC5DA1L4H1 AC002056.1-201ENST00000395613 760 ntBASIC20.33■□□□□ 0.84
SSC5DA1L4H1 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SSC5DA1L4H1 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SSC5DA1L4H1 AC067863.1-201ENST00000494933 530 ntBASIC20.33■□□□□ 0.84
SSC5DA1L4H1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
SSC5DA1L4H1 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms