Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CCDC189A1A4V9 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC189A1A4V9 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC189A1A4V9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC189A1A4V9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC189A1A4V9 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
CCDC189A1A4V9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC189A1A4V9 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCDC189A1A4V9 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC189A1A4V9 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC189A1A4V9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC189A1A4V9 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC189A1A4V9 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC189A1A4V9 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC189A1A4V9 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC189A1A4V9 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC189A1A4V9 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC189A1A4V9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC189A1A4V9 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC189A1A4V9 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC189A1A4V9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC189A1A4V9 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 KRT8P9-201ENST00000558927 1449 ntBASIC17.72■□□□□ 0.43
CCDC189A1A4V9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 PP12613-201ENST00000424958 2230 ntBASIC17.72■□□□□ 0.43
CCDC189A1A4V9 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 DOC2GP-204ENST00000639052 2548 ntBASIC17.72■□□□□ 0.43
CCDC189A1A4V9 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 AC132938.6-201ENST00000623828 1655 ntBASIC17.72■□□□□ 0.43
CCDC189A1A4V9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 AC116407.2-201ENST00000613639 860 ntBASIC17.72■□□□□ 0.43
CCDC189A1A4V9 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 LINC00167-201ENST00000530583 1419 ntBASIC17.72■□□□□ 0.43
CCDC189A1A4V9 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC189A1A4V9 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC189A1A4V9 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC189A1A4V9 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC189A1A4V9 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC189A1A4V9 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC189A1A4V9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC189A1A4V9 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC189A1A4V9 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC189A1A4V9 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC189A1A4V9 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC189A1A4V9 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC189A1A4V9 ECEL1P2-202ENST00000465689 757 ntBASIC17.71■□□□□ 0.43
CCDC189A1A4V9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.71■□□□□ 0.43
CCDC189A1A4V9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC189A1A4V9 AL031432.5-201ENST00000641059 760 ntBASIC17.71■□□□□ 0.43
CCDC189A1A4V9 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC189A1A4V9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC189A1A4V9 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC189A1A4V9 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC189A1A4V9 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC189A1A4V9 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCDC189A1A4V9 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC189A1A4V9 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC189A1A4V9 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC189A1A4V9 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
CCDC189A1A4V9 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC189A1A4V9 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC189A1A4V9 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC189A1A4V9 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms