Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV7S3A2A0A539 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
TCRBV7S3A2A0A539 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV7S3A2A0A539 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV7S3A2A0A539 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV7S3A2A0A539 AK4P3-201ENST00000418260 669 ntBASIC17.94■□□□□ 0.46
TCRBV7S3A2A0A539 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.94■□□□□ 0.46
TCRBV7S3A2A0A539 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV7S3A2A0A539 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV7S3A2A0A539 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.94■□□□□ 0.46
TCRBV7S3A2A0A539 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.94■□□□□ 0.46
TCRBV7S3A2A0A539 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.94■□□□□ 0.46
TCRBV7S3A2A0A539 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.94■□□□□ 0.46
TCRBV7S3A2A0A539 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TCRBV7S3A2A0A539 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.94■□□□□ 0.46
TCRBV7S3A2A0A539 LINC01311-201ENST00000565162 1445 ntBASIC17.94■□□□□ 0.46
TCRBV7S3A2A0A539 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV7S3A2A0A539 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV7S3A2A0A539 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV7S3A2A0A539 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV7S3A2A0A539 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV7S3A2A0A539 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV7S3A2A0A539 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.94■□□□□ 0.46
TCRBV7S3A2A0A539 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV7S3A2A0A539 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.94■□□□□ 0.46
TCRBV7S3A2A0A539 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV7S3A2A0A539 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TCRBV7S3A2A0A539 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 HOMER2P1-201ENST00000455653 964 ntBASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 AC083849.1-201ENST00000615227 514 ntBASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV7S3A2A0A539 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 AC116353.5-201ENST00000638148 1699 ntBASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV7S3A2A0A539 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV7S3A2A0A539 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV7S3A2A0A539 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV7S3A2A0A539 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV7S3A2A0A539 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.91■□□□□ 0.46
TCRBV7S3A2A0A539 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TCRBV7S3A2A0A539 AC016396.2-201ENST00000562575 1417 ntBASIC17.91■□□□□ 0.46
TCRBV7S3A2A0A539 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV7S3A2A0A539 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TCRBV7S3A2A0A539 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms