Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 AC006116.8-202ENST00000587620 1550 ntBASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 AC012317.2-201ENST00000623305 2251 ntBASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.88■□□□□ 0.61
SMIM28A0A1B0GU29 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
SMIM28A0A1B0GU29 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM28A0A1B0GU29 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
SMIM28A0A1B0GU29 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM28A0A1B0GU29 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM28A0A1B0GU29 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.87■□□□□ 0.61
SMIM28A0A1B0GU29 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM28A0A1B0GU29 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.87■□□□□ 0.61
SMIM28A0A1B0GU29 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SMIM28A0A1B0GU29 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM28A0A1B0GU29 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.87■□□□□ 0.61
SMIM28A0A1B0GU29 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.87■□□□□ 0.61
SMIM28A0A1B0GU29 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.87■□□□□ 0.61
SMIM28A0A1B0GU29 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.87■□□□□ 0.61
SMIM28A0A1B0GU29 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM28A0A1B0GU29 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.87■□□□□ 0.61
SMIM28A0A1B0GU29 AC006557.2-201ENST00000592985 1240 ntBASIC18.87■□□□□ 0.61
SMIM28A0A1B0GU29 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM28A0A1B0GU29 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.87■□□□□ 0.61
SMIM28A0A1B0GU29 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SMIM28A0A1B0GU29 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
SMIM28A0A1B0GU29 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM28A0A1B0GU29 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM28A0A1B0GU29 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM28A0A1B0GU29 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 AC104109.2-201ENST00000602919 1418 ntBASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 PMS2P1-201ENST00000431037 1228 ntBASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 RNA5SP415-201ENST00000517246 115 ntBASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 AL356488.2-201ENST00000602755 427 ntBASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 AC004706.3-202ENST00000621574 984 ntBASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 AC117500.6-201ENST00000624871 588 ntBASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
SMIM28A0A1B0GU29 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 ZNF259P1-201ENST00000407656 1365 ntBASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM28A0A1B0GU29 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.84■□□□□ 0.61
SMIM28A0A1B0GU29 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM28A0A1B0GU29 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms