Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
TRBV5-3A0A0A0MS03 PCDHA14-201ENST00000506751 2298 ntBASIC16.52■□□□□ 0.24
TRBV5-3A0A0A0MS03 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TRBV5-3A0A0A0MS03 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV5-3A0A0A0MS03 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV5-3A0A0A0MS03 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV5-3A0A0A0MS03 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.52■□□□□ 0.24
TRBV5-3A0A0A0MS03 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV5-3A0A0A0MS03 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.24
TRBV5-3A0A0A0MS03 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
TRBV5-3A0A0A0MS03 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV5-3A0A0A0MS03 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.52■□□□□ 0.24
TRBV5-3A0A0A0MS03 GPR32P1-201ENST00000601788 811 ntBASIC16.52■□□□□ 0.24
TRBV5-3A0A0A0MS03 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV5-3A0A0A0MS03 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV5-3A0A0A0MS03 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV5-3A0A0A0MS03 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV5-3A0A0A0MS03 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV5-3A0A0A0MS03 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRBV5-3A0A0A0MS03 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRBV5-3A0A0A0MS03 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRBV5-3A0A0A0MS03 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRBV5-3A0A0A0MS03 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRBV5-3A0A0A0MS03 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.52■□□□□ 0.23
TRBV5-3A0A0A0MS03 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
TRBV5-3A0A0A0MS03 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRBV5-3A0A0A0MS03 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 AC087499.1-201ENST00000418141 1075 ntBASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 AC019129.2-201ENST00000609837 1235 ntBASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 AC011558.1-201ENST00000623459 338 ntBASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 UBALD1-205ENST00000590891 2641 ntBASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV5-3A0A0A0MS03 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 FAM8A6P-201ENST00000407496 1135 ntBASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV5-3A0A0A0MS03 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms