Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC4Q9Y696 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.15■□□□□ 0.82
CLIC4Q9Y696 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC4Q9Y696 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.15■□□□□ 0.82
CLIC4Q9Y696 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC4Q9Y696 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CLIC4Q9Y696 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.15■□□□□ 0.82
CLIC4Q9Y696 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC4Q9Y696 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC4Q9Y696 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CLIC4Q9Y696 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.15■□□□□ 0.82
CLIC4Q9Y696 AL845331.1-201ENST00000424978 1190 ntBASIC20.15■□□□□ 0.82
CLIC4Q9Y696 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.15■□□□□ 0.82
CLIC4Q9Y696 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CLIC4Q9Y696 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC4Q9Y696 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC4Q9Y696 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC4Q9Y696 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC4Q9Y696 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC4Q9Y696 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC4Q9Y696 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC4Q9Y696 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
CLIC4Q9Y696 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CLIC4Q9Y696 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CLIC4Q9Y696 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.14■□□□□ 0.82
CLIC4Q9Y696 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLIC4Q9Y696 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CLIC4Q9Y696 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLIC4Q9Y696 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.14■□□□□ 0.81
CLIC4Q9Y696 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLIC4Q9Y696 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLIC4Q9Y696 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLIC4Q9Y696 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLIC4Q9Y696 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.14■□□□□ 0.81
CLIC4Q9Y696 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLIC4Q9Y696 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLIC4Q9Y696 TSPY22P-201ENST00000427496 604 ntBASIC20.14■□□□□ 0.81
CLIC4Q9Y696 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.14■□□□□ 0.81
CLIC4Q9Y696 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.14■□□□□ 0.81
CLIC4Q9Y696 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CLIC4Q9Y696 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.14■□□□□ 0.81
CLIC4Q9Y696 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLIC4Q9Y696 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CLIC4Q9Y696 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CLIC4Q9Y696 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CLIC4Q9Y696 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLIC4Q9Y696 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CLIC4Q9Y696 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.13■□□□□ 0.81
CLIC4Q9Y696 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 AC097374.2-201ENST00000618617 1306 ntBASIC20.13■□□□□ 0.81
CLIC4Q9Y696 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 COX5BP2-201ENST00000392354 334 ntBASIC20.13■□□□□ 0.81
CLIC4Q9Y696 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLIC4Q9Y696 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 AC138932.1-201ENST00000534164 6830 ntBASIC20.12■□□□□ 0.81
CLIC4Q9Y696 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLIC4Q9Y696 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms