Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 PNKD-204ENST00000436005 978 ntTSL 5 BASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
RTCBQ9Y3I0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 AL513480.1-201ENST00000451731 511 ntBASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 AC002558.1-201ENST00000488906 803 ntBASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
RTCBQ9Y3I0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 MYCLP1-201ENST00000372451 1075 ntBASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 ACTG1P4-201ENST00000425123 1122 ntBASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 ADH5P3-201ENST00000433842 1137 ntBASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 AC093520.2-201ENST00000561830 333 ntBASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 AC015911.4-201ENST00000588022 1070 ntBASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTCBQ9Y3I0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RTCBQ9Y3I0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTCBQ9Y3I0 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTCBQ9Y3I0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTCBQ9Y3I0 HNRNPFP1-201ENST00000391730 1133 ntBASIC22.09■■□□□ 1.13
RTCBQ9Y3I0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC22.09■■□□□ 1.13
RTCBQ9Y3I0 TAF8-206ENST00000472818 719 ntTSL 2 BASIC22.09■■□□□ 1.13
RTCBQ9Y3I0 GATB-205ENST00000508611 605 ntTSL 2 BASIC22.09■■□□□ 1.13
RTCBQ9Y3I0 AC069262.1-201ENST00000539058 672 ntBASIC22.09■■□□□ 1.13
RTCBQ9Y3I0 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTCBQ9Y3I0 AL390955.2-201ENST00000603032 514 ntBASIC22.09■■□□□ 1.13
RTCBQ9Y3I0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTCBQ9Y3I0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22.09■■□□□ 1.13
RTCBQ9Y3I0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC22.09■■□□□ 1.13
RTCBQ9Y3I0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
RTCBQ9Y3I0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
RTCBQ9Y3I0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTCBQ9Y3I0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RTCBQ9Y3I0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RTCBQ9Y3I0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
RTCBQ9Y3I0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RTCBQ9Y3I0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RTCBQ9Y3I0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms