Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC027601.4-201ENST00000611259 610 ntBASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 AC008735.5-201ENST00000623544 497 ntBASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 MIR940-201ENST00000401276 94 ntBASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 MIR1233-2-201ENST00000408138 82 ntBASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 MIR1233-1-201ENST00000408722 82 ntBASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 BX842568.4-201ENST00000421222 227 ntBASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 NKAPP1-205ENST00000585790 367 ntBASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 MTDHP4-201ENST00000600287 670 ntBASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 FAM197Y3-203ENST00000618346 717 ntBASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSX2IPQ9Y2D8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 AC096633.1-201ENST00000422446 749 ntBASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 AC007967.3-201ENST00000434308 558 ntBASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 AC092910.1-201ENST00000482027 1129 ntBASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 AC122714.2-201ENST00000502787 707 ntBASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 AC105339.3-201ENST00000560043 636 ntBASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 AC025062.2-201ENST00000605477 670 ntBASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 AC104109.2-201ENST00000602919 1418 ntBASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 AC022898.2-201ENST00000616822 1312 ntBASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.98■□□□□ 0.63
SSX2IPQ9Y2D8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 AC107918.4-202ENST00000641623 219 ntBASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms