Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 AC105020.1-201ENST00000435356 2205 ntBASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 DOC2GP-204ENST00000639052 2548 ntBASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
HHLA3Q9XRX5 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 CROCCP1-201ENST00000426910 5675 ntBASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 AC010240.3-201ENST00000607688 395 ntBASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 AC012306.2-201ENST00000609350 630 ntBASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 AL138966.2-201ENST00000621997 464 ntBASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HHLA3Q9XRX5 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
HHLA3Q9XRX5 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
HHLA3Q9XRX5 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC12.96□□□□□ -0.34
HHLA3Q9XRX5 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC12.96□□□□□ -0.34
HHLA3Q9XRX5 AC099343.3-201ENST00000605834 2503 ntBASIC12.96□□□□□ -0.34
HHLA3Q9XRX5 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HHLA3Q9XRX5 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
HHLA3Q9XRX5 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
HHLA3Q9XRX5 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
HHLA3Q9XRX5 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC12.96□□□□□ -0.34
HHLA3Q9XRX5 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
HHLA3Q9XRX5 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
HHLA3Q9XRX5 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms