Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SMC3Q9UQE7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMC3Q9UQE7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.76■□□□□ 0.91
SMC3Q9UQE7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMC3Q9UQE7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMC3Q9UQE7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMC3Q9UQE7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMC3Q9UQE7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMC3Q9UQE7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SMC3Q9UQE7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SMC3Q9UQE7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMC3Q9UQE7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMC3Q9UQE7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.76■□□□□ 0.91
SMC3Q9UQE7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
SMC3Q9UQE7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SMC3Q9UQE7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SMC3Q9UQE7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 BX276092.7-203ENST00000637198 1536 ntBASIC20.75■□□□□ 0.91
SMC3Q9UQE7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.75■□□□□ 0.91
SMC3Q9UQE7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.75■□□□□ 0.91
SMC3Q9UQE7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 FAM8A6P-201ENST00000407496 1135 ntBASIC20.74■□□□□ 0.91
SMC3Q9UQE7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 AC011558.1-201ENST00000623459 338 ntBASIC20.74■□□□□ 0.91
SMC3Q9UQE7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 AL121761.2-201ENST00000598007 1648 ntBASIC20.74■□□□□ 0.91
SMC3Q9UQE7 OR6D1P-203ENST00000641209 4860 ntBASIC20.74■□□□□ 0.91
SMC3Q9UQE7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMC3Q9UQE7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMC3Q9UQE7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMC3Q9UQE7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.73■□□□□ 0.91
SMC3Q9UQE7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMC3Q9UQE7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.73■□□□□ 0.91
SMC3Q9UQE7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMC3Q9UQE7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SMC3Q9UQE7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMC3Q9UQE7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMC3Q9UQE7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMC3Q9UQE7 STARP1-201ENST00000397973 869 ntBASIC20.73■□□□□ 0.91
SMC3Q9UQE7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMC3Q9UQE7 AC092597.1-201ENST00000487352 616 ntBASIC20.73■□□□□ 0.91
SMC3Q9UQE7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.73■□□□□ 0.91
SMC3Q9UQE7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SMC3Q9UQE7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
SMC3Q9UQE7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMC3Q9UQE7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms